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Updated: Aug 15, 2026

Sheathless Capillary Electrophoresis–Mass Spectrometry for Metabolic Profiling of Biological Samples
Published on: October 1, 2016
Quantitation in capillary electrophoresis-mass spectrometry
Jens Ohnesorge1, Christian Neusüss, Hermann Wätzig
1Institut für Pharmazeutische Chemie, TU Braunschweig, Braunschweig, Germany.
Capillary electrophoresis-mass spectrometry (CE-MS) offers sensitive and reproducible quantitative analysis, crucial for pharmaceutical and biotech applications. Careful method optimization, especially of the CE-MS interface, ensures reliable results with precision below 5% RSD.
Area of Science:
- Analytical Chemistry
- Biotechnology
- Pharmaceutical Analysis
Background:
- Capillary electrophoresis-mass spectrometry (CE-MS) is emerging as a powerful alternative to liquid chromatography-mass spectrometry (LC-MS).
- While primarily used for characterization and identification, quantitative applications of CE-MS are increasingly important in pharmaceutical and biotechnological fields.
- Achieving sensitive and reproducible quantitative results requires careful consideration of methodological aspects.
Purpose of the Study:
- To summarize and evaluate methodological aspects for sensitive and reproducible quantitative CE-MS.
- To highlight critical factors for successful quantitative CE-MS analysis.
- To provide an overview of quantitative measurements performed by CE-MS through a literature survey.
Main Methods:
- Evaluation of methodological aspects for sensitive and reproducible CE-MS.
- Addressing matrix effects on the electrospray process, similar to LC-MS.
- Focusing on the CE-MS interface, a critical component for quantitative analysis.
- Assessing linearity over multiple orders of magnitude.
- Literature survey of quantitative CE-MS applications.
Main Results:
- Linearity over more than three orders of magnitude can be achieved with CE-electrospray ionization-mass spectrometry (CE-ESI-MS).
- Matrix effects on the electrospray process must be carefully managed for quantitative CE-MS.
- The CE-MS interface requires special attention due to its complexity.
- Precision can be significantly improved (doubled) by using isotopically labeled internal standards compared to structurally related ones.
- A precision level better than 5% relative standard deviation (RSD) is achievable.
Conclusions:
- CE-MS is a viable technique for quantitative analysis in pharmaceutical and biotechnological applications.
- Optimization of the CE-MS interface and management of matrix effects are key to achieving high-quality quantitative data.
- The use of isotopically labeled internal standards enhances precision, enabling reliable quantification with CE-MS.
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