Mycobacterium tuberculosis protein tyrosine phosphatase PtpB structure reveals a diverged fold and a buried active

Christoph Grundner1, Ho-Leung Ng, Tom Alber

  • 1Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, California 94720, USA.

Insights

Mycobacterium tuberculosis secretes protein tyrosine phosphatases (PTPs) like PtpB to disrupt host cell signaling. Structural analysis revealed unique features protecting PtpB, highlighting evolutionary adaptations in bacterial PTPs.

Area of Science:

  • Microbiology
  • Structural Biology
  • Biochemistry

Background:

  • Intracellular pathogenic bacteria, such as Mycobacterium tuberculosis, can manipulate host cell signaling pathways to establish infection.
  • Mycobacterium tuberculosis protein tyrosine phosphatases (PTPs), PtpA and PtpB, are implicated in interfering with host cell signals, but their mechanisms remain unclear.

Purpose of the Study:

  • To elucidate the structural basis of PtpB's function and substrate recognition.
  • To understand the regulatory mechanisms and unique structural features of Mycobacterium tuberculosis PTPs.

Main Methods:

  • Determined the 1.7 Å resolution crystal structure of PtpB in complex with phosphate.
  • Performed biochemical studies to investigate enzyme activity and stability.

Main Results:

  • PtpB adopts a simplified PTP fold with unique features, including a disordered acidic loop and a flexible two-helix lid covering the active site, characteristic of mycobacterial orthologs.
  • The lid structure may protect the phosphatase from oxidative inactivation through substrate mimicry.
  • Significant structural variations, including insertions and deletions, were observed outside the active site module.

Conclusions:

  • PtpB possesses unique structural adaptations potentially related to host-pathogen interactions and survival.
  • The PTP family exhibits significant structural plasticity, particularly in mycobacteria, suggesting evolutionary pressures driving diversification beyond the conserved active site.

Related Concept Videos

Pulmonary Tuberculosis II01:28

Pulmonary Tuberculosis II

Tuberculosis, or TB, is a bacterial infectious disease caused by Mycobacterium tuberculosis. While its primary impact is on the lungs, leading to pulmonary tuberculosis, it can also affect various other organs, a condition referred to as extrapulmonary tuberculosis.
Here is a detailed explanation of its pathophysiology:
Transmission: The process begins when a person inhales droplet nuclei containing M. tuberculosis. These are typically released into the air when an individual with pulmonary or...
Tuberculosis01:23

Tuberculosis

Tuberculosis (TB) remains a significant global health concern, primarily targeting the lungs and spreading through airborne transmission. Infection begins when aerosolized droplet nuclei, expelled by an individual with active TB, are inhaled by another person. These microscopic particles carry Mycobacterium tuberculosis, the causative agent of TB. Upon reaching the alveoli, the bacilli are engulfed by alveolar macrophages. However, due to their specialized lipid-rich cell wall, these pathogens...
Cytoskeletal Proteins in Bacteria01:29

Cytoskeletal Proteins in Bacteria

Bacterial cells were initially considered simple, randomly organized structures lacking a cytoskeleton. However, the discovery of cytoskeleton homologs in bacteria led to the change of this opinion. Bacterial cytoskeletal filaments regulate the cell shape, cell polarity, cell division, and partitioning of plasmids during cell division. It was later discovered that bacterial cytoskeletal proteins, mainly actin and tubulin homologs, are diverse compared to their eukaryotic counterparts. On the...
Pulmonary Tuberculosis IV01:26

Pulmonary Tuberculosis IV

Tuberculosis, more commonly referred to as TB, is an infectious disease stemming from Mycobacterium tuberculosis. While it primarily impacts the lungs, TB can also affect other body areas. Given its severity and global impact, timely and accurate diagnosis is crucial for controlling its spread and improving patient outcomes.
Several diagnostic approaches are used to detect TB. The conventional method is the Tuberculin Skin Test (TST), also known as the Mantoux test. However, this method has...
Pulmonary Tuberculosis V01:28

Pulmonary Tuberculosis V

Medical management of tuberculosis (TB) patients involves a comprehensive approach that includes diagnosis, treatment, and monitoring. The specific strategies can vary depending on the type of tuberculosis (latent or active), the patient's overall health status, and other considerations.
Latent tuberculosis infection occurs when TB bacteria are present in a person's body, but are not causing illness or symptoms. It is not contagious, and preventive treatment is crucial to avoid the progression...
ATP Synthase: Structure01:18

ATP Synthase: Structure

ATP synthase or ATPase is among the most conserved proteins found in bacteria, mammals, and plants. This enzyme can catalyze a forward reaction in response to the electrochemical gradient, producing ATP from ADP and inorganic phosphate. ATP synthase can also work in a reverse direction by hydrolyzing ATP and generating an electrochemical gradient. Different forms of ATP synthases have evolved special features to meet the specific demands of the cell. Based on their specific feature, ATP...