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Updated: Aug 14, 2026

DNA-affinity-purified Chip (DAP-chip) Method to Determine Gene Targets for Bacterial Two component Regulatory Systems
Published on: July 21, 2014
Role of Salmonella enterica serovar Typhimurium two-component system PreA/PreB in modulating PmrA-regulated gene
Massimo Merighi1, Amanda Carroll-Portillo, Alecia N Septer
1Department of Molecular Virology, Immunology, and Medical Genetics and Center for Microbial Interface Biology, The Ohio State University, 270 TMRF, 420 W. 12th Avenue, Columbus, OH 43210, USA.
Abstract:
The PmrA/PmrB two-component system encoded by the pmrCAB operon regulates the modification of Salmonella enterica serovar Typhimurium lipopolysaccharide leading to polymyxin B resistance. PmrA and PhoP are the only known activators of pmrCAB. A transposon mutagenesis screen for additional regulators of a pmrC::MudJ fusion led to the identification of a two-component system, termed PreA/PreB (pmrCAB regulators A and B), that controls the transcription of the pmrCAB operon in response to unknown signals. The initial observations indicated that insertions in, or a deletion of, the preB sensor, but not the preA response regulator, caused upregulation of pmrCAB. Interestingly, the expression of pmrCAB was not upregulated in a preAB mutant grown in LB broth, implicating PreA in the increased expression of pmrCAB in the preB strain. This was confirmed by overexpression of preA(+) in preAB or preB backgrounds, which resulted in significant upregulation or further upregulation of pmrCAB. No such effect was observed in any tested preB(+) backgrounds. Additionally, an ectopic construct expressing a preA[D51A] allele also failed to upregulate pmrC in any of the pre backgrounds tested, which implies that there is a need for phosphorylation in the activation of the target genes. The observed upregulation of pmrCAB occurred independently of the response regulators PmrA and PhoP. Although a preB mutation led to increased transcription of pmrCAB, this did not result in a measurable effect on polymyxin B resistance. Our genetic data support a model of regulation whereby, in response to unknown signals, the PreB sensor activates PreA, which in turn indirectly upregulates pmrCAB transcription.
Insights
Researchers identified a new two-component system, PreA/PreB, that regulates Salmonella Typhimurium lipopolysaccharide modification and polymyxin B resistance by controlling pmrCAB operon transcription.
Area of Science:
- Microbiology
- Bacterial genetics
- Two-component signal transduction systems
Background:
- The PmrA/PmrB two-component system regulates lipopolysaccharide modification in Salmonella Typhimurium, conferring resistance to polymyxin B.
- PmrA and PhoP are the only known activators of the pmrCAB operon, which is crucial for this resistance mechanism.
Purpose of the Study:
- To identify novel regulators of the pmrCAB operon beyond PmrA and PhoP.
- To elucidate the regulatory mechanism controlling pmrCAB transcription in response to environmental signals.
Main Methods:
- Transposon mutagenesis screen using a pmrC::MudJ fusion reporter.
- Genetic analysis including gene deletions, insertions, and overexpression studies.
- Analysis of pmrCAB operon expression and polymyxin B resistance.
Main Results:
- A novel two-component system, PreA/PreB, was identified as a regulator of pmrCAB transcription.
- Mutations in the preB sensor component led to pmrCAB upregulation, dependent on the phosphorylation status of the PreA response regulator.
- Upregulation of pmrCAB by PreA/PreB occurred independently of PmrA and PhoP and did not significantly impact polymyxin B resistance.
Conclusions:
- The PreA/PreB system indirectly upregulates pmrCAB transcription in response to unknown signals.
- PreB acts as a sensor, activating PreA, which then modulates pmrCAB expression.
- This novel regulatory pathway expands our understanding of lipopolysaccharide modification and bacterial resistance mechanisms.
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