Related Experiment Video
Updated: Jul 10, 2026

10:55
Retrograde Labeling of Retinal Ganglion Cells in Adult Zebrafish with Fluorescent Dyes
Published on: May 3, 2014
SLC24A5, a putative cation exchanger, affects pigmentation in zebrafish and humans
Rebecca L Lamason1, Manzoor-Ali P K Mohideen, Jason R Mest
1Jake Gittlen Cancer Research Foundation, Department of Pathology, The Pennsylvania State University College of Medicine, Hershey, PA 17033, USA.
Summary
The golden gene mutation in zebrafish affects melanosome development, similar to lighter human skin. The human SLC24A5 gene variant is linked to lighter skin pigmentation in European populations.
Area of Science:
- Genetics
- Molecular Biology
- Human Pigmentation
Background:
- Lighter human pigmentation is linked to reduced melanosome number, size, and density.
- Melanosomes are key organelles responsible for skin and hair color.
Purpose of the Study:
- To investigate the genetic basis of pigmentation differences.
- To identify the gene responsible for the zebrafish "golden" mutation and its role in melanosome biogenesis.
- To explore the evolutionary history and population genetics of the human ortholog, SLC24A5, in relation to skin pigmentation.
Main Methods:
- Zebrafish genetic screening and mutation analysis.
- Gene cloning and sequencing to identify the golden gene.
- Expression analysis and subcellular localization studies.
- Comparative genomics and population genetic analyses of human SLC24A5.
Main Results:
- The zebrafish golden mutation was identified as a defect in the slc24a5 (nckx5) gene.
- slc24a5 localizes to intracellular membranes, likely melanosomes or their precursors.
- The human SLC24A5 ortholog is functionally similar in zebrafish.
- A specific human SLC24A5 allele is prevalent in European populations and associated with lighter skin and reduced genetic diversity.
Conclusions:
- SLC24A5 plays a critical role in melanosome biogenesis and pigmentation.
- The evolutionarily conserved SLC24A5 gene has been under strong selection in human populations, contributing to variations in skin color.
Related Concept Videos
X-linked Traits
In most mammalian species, females have two X sex chromosomes and males have an X and Y. As a result, mutations on the X chromosome in females may be masked by the presence of a normal allele on the second X. In contrast, a mutation on the X chromosome in males more often causes observable biological defects, as there is no normal X to compensate. Trait variations arising from mutations on the X chromosome are called “X-linked”.
Position-effect Variegation
In 1928, a German botanist Emil Heitz observed the moss nuclei with a DNA binding dye. He observed that while some chromatin regions decondense and spread out in the interphase nucleus, others do not. He termed them euchromatin and heterochromatin, respectively. He proposed that the heterochromatin regions reflect a functionally inactive state of the genome. It was later confirmed that heterochromatin is transcriptionally repressed, and euchromatin is transcriptionally active chromatin.
Background and Environment Affect Phenotype
Although the genetic makeup of an organism plays a major role in determining the phenotype, there are also several environmental factors, such as temperature, oxygen availability, presence of mutagens, that can alter an organism’s phenotype.
An example of how genetic background affects phenotype can be seen in horses. The Extension gene in horses is responsible for their coat color. A wild-type gene (EE) produces black pigment in the coat, while a mutant gene (ee) produces red pigment. A...
An example of how genetic background affects phenotype can be seen in horses. The Extension gene in horses is responsible for their coat color. A wild-type gene (EE) produces black pigment in the coat, while a mutant gene (ee) produces red pigment. A...
X and Y Chromosomes
Among mammals, the gender of an organism is determined by the sex chromosomes. Humans have two sex chromosomes, X and Y. Every human diploid cell has 22 pairs of autosomes and one pair of sex chromosomes. A human female has two X chromosomes, while a male has one X chromosome and one Y chromosome.
The germline cells such as egg and sperm cells carry only half the number of chromosomes, i.e., 22 autosomes and one sex chromosome. All eggs have an X chromosome, while sperm cells can carry an X or...
The germline cells such as egg and sperm cells carry only half the number of chromosomes, i.e., 22 autosomes and one sex chromosome. All eggs have an X chromosome, while sperm cells can carry an X or...

