Related Experiment Video
Updated: Aug 14, 2026

11:15
Next Generation Sequencing for the Detection of Actionable Mutations in Solid and Liquid Tumors
Published on: September 20, 2016
PMM2 intronic branch-site mutations in CDG-Ia
Sandrine Vuillaumier-Barrot1, Christiane Le Bizec, Pascale De Lonlay
1Biochimie A, Hôpital Bichat-Claude Bernard, AP-HP, Paris, France. sandrne.vuillaumier@bch.ap-hop-paris.fr
Molecular Genetics and Metabolism
|December 27, 2005
Summary
Two new intronic mutations in the PMM2 gene cause exon skipping in Congenital Disorders of Glycosylation (CDG-Ia). Accurate molecular diagnosis requires both DNA and mRNA analysis to detect these PMM2 gene mutations.
Area of Science:
- Genetics
- Molecular Biology
- Biochemistry
Background:
- Congenital Disorders of Glycosylation (CDG, OMIM#212065)-Ia is a severe autosomal recessive disorder.
- It is characterized by central nervous system dysfunction and multiorgan failure.
- These clinical manifestations are linked to mutations in the PMM2 gene.
Observation:
- Two patients with CDG-Ia were identified as compound heterozygotes.
- They carried two novel intronic mutations: c.340 -23A > G (IVS7 -23A > G) in intron 7 and c.179 -25A > G (IVS2 -25A > G) in intron 2.
- These mutations affect a conserved adenosine in a consensus branch-site sequence and are associated with missense mutations (R141H and D65Y).
Findings:
- The intronic mutations c.179 -25A > G and c.340 -23A > G lead to the loss of exon 3 and exon 8 from the RNA transcript, respectively.
- This exon skipping is a direct consequence of the intronic sequence alterations.
- The identified mutations provide new insights into the molecular mechanisms underlying CDG-Ia.
Implications:
- These intronic mutations can complicate molecular diagnosis of CDG-Ia.
- Failure to use appropriate intronic primers can lead to missed diagnoses.
- Comprehensive molecular diagnostic strategies must include both DNA and mRNA analysis to accurately identify all PMM2 gene mutations causing CDG-Ia.
Related Concept Videos
Point and Frameshift Mutations
Point mutations are genetic alterations involving the change of a single nucleotide base pair in DNA. Depending on how the alteration affects protein synthesis, they can lead to various consequences.Point mutations fall into the following types:Silent mutations occur when a nucleotide change does not alter the amino acid sequence due to the redundancy of the genetic code. For instance, changing ACC to ACA still encodes threonine, leaving the protein function unaffected. This occurs because...
Spontaneous and Induced Mutations
Spontaneous mutations arise infrequently during DNA replication due to errors in the process. A key factor behind these errors is tautomeric shifts in nitrogenous bases, where bases transition from keto to enol forms or amino to imino forms. This shift can alter base-pairing rules, leading to mutations. Additionally, reactive oxygen species (ROS) arising from aerobic metabolism can damage DNA, resulting in depurination (loss of a purine base) or depyrimidination (loss of a pyrimidine base).
Mutations
Mutations are changes in the sequence of DNA. These changes can occur spontaneously or they can be induced by exposure to environmental factors. Mutations can be characterized in a number of different ways: whether and how they alter the amino acid sequence of the protein, whether they occur over a small or large area of DNA, and whether they occur in somatic cells or germline cells.
Chromosomal Alterations Are Large-Scale Mutations
While point mutations are changes in a single nucleotide in...
Chromosomal Alterations Are Large-Scale Mutations
While point mutations are changes in a single nucleotide in...
Mutations
Overview
Mutations
Overview
Long-patch Base Excision Repair
Since the discovery of the two BER pathways, there has been a debate about how a cell chooses one pathway over the other and the factors determining this selection. Numerous in vitro experiments have pointed out multiple determinants for the sub-pathway selection. These are:
