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Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Target structure-based discovery of small molecules that block human p53 and CREB binding protein association
Sachchidanand1, Lois Resnick-Silverman, Sherry Yan
1Structural Biology Program, Department of Physiology and Biophysics, Mount Sinai School of Medicine, New York University, New York 10029, USA.
Abstract:
Lysine acetylation of human tumor suppressor p53 in response to cellular stress signals is required for its function as a transcription factor that regulates cell cycle arrest, senescence, or apoptosis. Here, we report small molecules that block lysine 382-acetylated p53 association with the bromodomain of the coactivator CBP, an interaction essential for p53-induced transcription of the cell cycle inhibitor p21 in response to DNA damage. These chemicals were discovered in target structure-guided nuclear magnetic resonance spectroscopy screening of a focused chemical library constructed based on the structural knowledge of CBP bromodomain/p53-AcK382 binding. Structural characterization shows that these chemicals inhibit CBP/p53 association by binding to the acetyl-lysine binding site of the bromodomain. Cell-based functional assays demonstrate that the lead chemicals can modulate p53 stability and function in response to DNA damage.
Insights
Small molecules were developed to block the interaction between acetylated p53 (lysine 382) and the CBP bromodomain. This inhibition is crucial for p53
Area of Science:
- Biochemistry
- Molecular Biology
- Drug Discovery
Background:
- Lysine acetylation of tumor suppressor p53 is vital for its role in regulating cellular responses to stress, including cell cycle arrest, senescence, and apoptosis.
- The interaction between acetylated p53 and the CBP bromodomain is essential for p53-mediated transcription of genes like p21, a cell cycle inhibitor.
Purpose of the Study:
- To discover small molecules that inhibit the association between lysine 382-acetylated p53 and the CBP bromodomain.
- To characterize the mechanism of inhibition and evaluate the compounds' effects on p53 function in cellular stress response.
Main Methods:
- Structure-guided screening using nuclear magnetic resonance (NMR) spectroscopy on a focused chemical library.
- Design of small molecules based on the structural knowledge of the CBP bromodomain/p53-AcK382 complex.
- Structural characterization of small molecule binding to the CBP bromodomain.
- Cell-based functional assays to assess the impact on p53 stability and function.
Main Results:
- Identification of small molecules that effectively block the p53-CBP bromodomain interaction.
- Structural studies confirmed that these molecules bind to the acetyl-lysine binding site of the CBP bromodomain.
- Cellular assays demonstrated that the lead compounds can modulate p53 stability and its transcriptional activity in response to DNA damage.
Conclusions:
- Small molecules targeting the p53-CBP bromodomain interaction offer a novel strategy for modulating p53 function.
- These inhibitors represent potential therapeutic agents for diseases involving p53 dysregulation, particularly in cancer.
- The findings provide a structural basis for the rational design of future p53-CBP interaction modulators.
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