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Updated: Jul 19, 2026

A Practical Guide to Phylogenetics for Nonexperts
Published on: February 5, 2014
Calculation, visualization, and manipulation of MASTs (Maximum Agreement Subtrees)
1Computer Science Department, University of Georgia, USA. dong@cs.uga.edu
Unlabelled:
Phylogenetic trees are used to represent the evolutionary history of a set of species. Comparison of multiple phylogenetic trees can help researchers find the common classification of a tree group, compare tree construction inferences or obtain distances between trees. We present TreeAnalyzer, a freely available package for phylogenetic tree comparison. A MAST (Maximum Agreement Subtree) algorithm is implemented to compare the trees. Additional features of this software include tree comparison, visualization, manipulation, labeling, and printing.
Availability:
http://www.cs.uga.edu/~eileen/TreeAnalyzer.
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