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Updated: Aug 11, 2026

A Mass Spectrometry-Based Approach to Identify Phosphoprotein Phosphatases and their Interactors
Published on: April 29, 2022
Clathrin light chain b is capable of affecting potently a major protein phosphatase from microtubules (MT-PP1)
Akira Hiraga1, Nick Morrice, Eiko Honda
1Department of Biochemistry, Institute of Development, Aging and Cancer, Tohoku University, 4-1 Seiryomachi, Aobaku, Sendai 980-8575, Japan. hiraga@idac.tohoku.ac.jp
Abstract:
Clathrin light chain (CL) b purified from bovine brain postmicrotubule supernatant and identified by mass spectrometry potently inhibited a catalytic activity of a major protein phosphatase (PP) that was copurified with microtubules and recognized by antiPP1 antibodies. CLb similarly affected the catalytic subunit and holoenzyme of the PP, little inhibiting the activity of PP2A. Although the CLb from clathrin-coated vesicles was several hundredfold weaker than our purified CLb, the CLb in the postmicrotubule supernatant, independent of whether it was sedimentable or soluble, was as active as the purified CLb. Thus CLb may be a potent regulator of the PP.
Insights
Clathrin light chain b (CLb) potently inhibits protein phosphatase 1 (PP1) activity. This suggests CLb may be a key regulator of PP1 in the brain.
Area of Science:
- Biochemistry
- Cell Biology
- Neuroscience
Background:
- Protein phosphatases (PPs) are crucial enzymes involved in cellular regulation.
- Clathrin light chain b (CLb) is a component of the clathrin coat involved in protein trafficking.
Purpose of the Study:
- To investigate the interaction between CLb and protein phosphatases.
- To determine if CLb affects the catalytic activity of major protein phosphatases.
Main Methods:
- Purification of CLb from bovine brain post-microtubule supernatant.
- Mass spectrometry for CLb identification.
- Enzyme assays to measure protein phosphatase activity in the presence of CLb.
Main Results:
- Purified CLb potently inhibited a major protein phosphatase (PP) recognized by anti-PP1 antibodies, which was copurified with microtubules.
- CLb affected both the catalytic subunit and holoenzyme of PP1 but had little effect on PP2A.
- CLb from clathrin-coated vesicles was significantly less potent than purified CLb, but CLb in the post-microtubule supernatant was highly active.
Conclusions:
- CLb is a potent inhibitor of protein phosphatase 1.
- CLb present in the post-microtubule supernatant, whether soluble or sedimentable, exhibits significant PP1 inhibitory activity.
- CLb may function as a critical regulator of PP1 activity in vivo.
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