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Updated: Aug 11, 2026

High-resolution Functional Magnetic Resonance Imaging Methods for Human Midbrain
Published on: May 10, 2012
Quantitative comparison of AIR, SPM, and the fully deformable model for atlas-based segmentation of functional and
Minjie Wu1, Owen Carmichael, Pilar Lopez-Garcia
1Department of Electrical and Computer Engineering, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Abstract:
Typical packages used for coregistration in functional image analyses include automated image registration (AIR) and statistical parametric mapping (SPM). However, both methods have limited-dimension deformation models. A fully deformable model, which combines the piecewise linear registration for coarse alignment with demons algorithm for voxel-level refinement, allows a higher degree of spatial deformation. This leads to a more accurate colocalization of the functional signal from different subjects and therefore can produce a more reliable group average signal. We quantitatively compared the performance of the three different registration approaches through a series of experiments and we found that the fully deformable model consistently produces a more accurate structural segmentation and a more reliable functional signal colocalization than does AIR or SPM.

