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Poly(ADP-RIBOSE) polymerase-1 (Parp-1) antagonizes topoisomerase I-dependent recombination stimulation by P53
Cindy Baumann1, Gisa S Boehden, Alexander Bürkle
1Universitätsfrauenklinik, Prittwitzstrasse 43 D-89075 Ulm, Germany.
Abstract:
PARP-1 interacts with and poly(ADP-ribosyl)ates p53 and topoisomerase I, which both participate in DNA recombination. Previously, we showed that PARP-1 downregulates homology-directed double-strand break (DSB) repair. We also discovered that, despite the well-established role of p53 as a global suppressor of error-prone recombination, p53 enhances homologous recombination (HR) at the RARalpha breakpoint cluster region (bcr) comprising topoisomerase I recognition sites. Using an SV40-based assay and isogenic cell lines differing in the p53 and PARP-1 status we demonstrate that PARP-1 counteracts HR enhancement by p53, although DNA replication was largely unaffected. When the same DNA element was integrated in an episomal recombination plasmid, both p53 and PARP-1 exerted anti-recombinogenic rather than stimulatory activities. Strikingly, with DNA substrates integrated into cellular chromosomes, enhancement of HR by p53 and antagonistic PARP-1 action was seen, very similar to the HR of viral minichromosomes. siRNA-mediated knockdown revealed the essential role of topoisomerase I in this regulatory mechanism. However, after I-SceI-meganuclease-mediated cleavage of the chromosomally integrated substrate, no topoisomerase I-dependent effects by p53 and PARP-1 were observed. Our data further indicate that PARP-1, probably through topoisomerase I interactions rather than poly(ADP-ribosyl)ation, prevents p53 from stimulating spontaneous HR on chromosomes via topoisomerase I activity.
Insights
Poly(ADP-ribose) polymerase 1 (PARP-1) counteracts p53
Area of Science:
- Molecular Biology
- DNA Repair Mechanisms
- Cancer Research
Background:
- PARP-1 interacts with p53 and topoisomerase I, key players in DNA recombination.
- PARP-1 is known to downregulate homology-directed double-strand break (DSB) repair.
- p53, typically a suppressor of error-prone recombination, enhances homologous recombination (HR) at specific sites involving topoisomerase I.
Purpose of the Study:
- To investigate the interplay between PARP-1 and p53 in regulating homologous recombination (HR).
- To elucidate the role of topoisomerase I in the regulatory mechanism.
- To determine whether PARP-1's effect is mediated by poly(ADP-ribosyl)ation or direct interaction.
Main Methods:
- Utilized an SV40-based assay and isogenic cell lines with varying p53 and PARP-1 status.
- Employed episomal recombination plasmids and chromosomally integrated DNA substrates.
- Performed siRNA-mediated knockdown of topoisomerase I and utilized I-SceI-meganuclease cleavage.
Main Results:
- PARP-1 antagonizes p53-mediated HR enhancement in chromosomally integrated substrates.
- Both p53 and PARP-1 showed anti-recombinogenic activity on episomal plasmids.
- Topoisomerase I is essential for the regulatory mechanism, but its role is not observed after specific cleavage.
- PARP-1 likely prevents p53 from stimulating HR via topoisomerase I interaction, not poly(ADP-ribosyl)ation.
Conclusions:
- PARP-1 negatively regulates p53-stimulated homologous recombination on chromosomes.
- The interaction between PARP-1 and topoisomerase I is crucial for this regulation.
- PARP-1's inhibitory effect on p53-mediated HR is likely independent of its poly(ADP-ribosyl)ation activity.
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