Real-time forecast of multiphase outbreak
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Updated: Aug 11, 2026

Development of Multiplex Real-Time RT-qPCR Assays for the Detection of SARS-CoV-2, Influenza A/B, and MERS-CoV
Published on: November 10, 2023
Ying-Hen Hsieh1, Yuan-Sen Cheng
1National Chung Hsing University, Taichung, Taiwan. hsieh@amath.nchu.edu.tw
Abstract:
We used a single equation with discrete phases to fit the daily cumulative case data from the 2003 severe acute respiratory syndrome outbreak in Toronto. This model enabled us to estimate turning points and case numbers during the 2 phases of this outbreak. The 3 estimated turning points are March 25, April 27, and May 24. The estimated case number during the first phase of the outbreak between February 23 and April 26 is 140.53 (95% confidence interval [CI] 115.88-165.17) if we use the data from February 23 to April 4; and 249 (95% CI: 246.67-251.25) at the end of the second phase on June 12 if we use the data from April 28 to June 4. The second phase can be detected by using case data just 3 days past the beginning of the phase, while the first and third turning points can be identified only approximately 10 days afterwards. Our modeling procedure provides insights into ongoing outbreaks that may facilitate real-time public health responses.
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