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A Colorimetric Assay that Specifically Measures Granzyme B Proteolytic Activity: Hydrolysis of Boc-Ala-Ala-Asp-S-Bzl
Published on: November 28, 2014
Identification of {alpha}-tubulin as a granzyme B substrate during CTL-mediated apoptosis
Ing Swie Goping1, Tracy Sawchuk, D Alan Underhill
1Department of Biochemistry, University of Alberta, Edmonton, Alberta, Canada, T6G 2H7.
Abstract:
Cytotoxic lymphocytes induce target cell apoptosis via two major pathways: Fas/FasL and granule exocytosis. The latter pathway has largely been defined by the roles of the pore-forming protein perforin and by the serine proteinases granzymes A and B. Upon entry into target cells, the granzymes cleave substrates that ultimately result in cell death. To gain further insight into granzyme B function, we have identified novel substrates. SDS-PAGE analysis of S100 cell lysates identified a 51 kDa protein that was cleaved by granzyme B. Mass spectrometry analysis revealed that this fragment was the microtubule protein, alpha-tubulin, which was confirmed by western blotting. In addition, two-dimensional gel analysis showed that the truncated form of alpha-tubulin had a more basic isoelectric point than the full-length molecule, suggesting that granzyme B removed the acidic C-terminus. Site-directed mutagenesis within this region of alpha-tubulin revealed the granzyme B recognition site, which is conserved in a subset of alpha-tubulin isoforms. Significantly, we showed that alpha-tubulin was cleaved in target cells undergoing apoptosis as induced by cytotoxic T lymphocytes. Therefore, in addition to its role in the activation of mitochondria during apoptosis, these results suggest a role for granzyme B in the dismantling of the cytoskeleton.
Insights
Cytotoxic T lymphocytes use granzyme B to cleave alpha-tubulin, a key microtubule protein. This finding reveals a new role for granzyme B in cytoskeleton dismantling during apoptosis.
Area of Science:
- Immunology
- Cell Biology
- Biochemistry
Background:
- Cytotoxic lymphocytes induce apoptosis via Fas/FasL and granule exocytosis pathways.
- Granule exocytosis involves perforin and serine proteases like granzyme B, which cleave substrates to induce cell death.
Purpose of the Study:
- To identify novel substrates of granzyme B.
- To elucidate the role of granzyme B in target cell apoptosis and cytoskeleton dynamics.
Main Methods:
- SDS-PAGE and mass spectrometry to identify cleaved proteins.
- Western blotting and 2D gel electrophoresis to confirm and characterize cleavage products.
- Site-directed mutagenesis to identify the granzyme B recognition site.
Main Results:
- Identified alpha-tubulin as a novel granzyme B substrate, cleaved at its acidic C-terminus.
- Determined the specific granzyme B recognition site within alpha-tubulin.
- Confirmed alpha-tubulin cleavage in cytotoxic T lymphocyte-induced apoptosis.
Conclusions:
- Granzyme B cleaves alpha-tubulin, contributing to cytoskeleton dismantling during apoptosis.
- This expands the known functions of granzyme B beyond mitochondrial pathways.
- Suggests a significant role for granzyme B in cytoskeletal reorganization during immune responses.

