Related Experiment Video
Updated: Aug 11, 2026

Multi-Gene Single Nucleotide Polymorphism Detection in Gastric Cancer Based on Ion Semiconductor Sequencing Platform
Published on: May 10, 2024
The inverse relationship between reduced folate carrier function and pemetrexed activity in a human colon cancer cell
Shrikanta Chattopadhyay1, Rongbao Zhao, Sergey A Krupenko
1Department of Medicine, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, NY 10461, USA.
Abstract:
Pemetrexed, a new generation antifolate recently approved for the treatment of mesothelioma and non-small cell lung cancer, is an excellent substrate for the reduced folate carrier (RFC). To explore the carrier's effect on pemetrexed activity, RFC was inactivated in HCT-15 colon cancer cells by mutagenesis and PT632 selective pressure. A clone (PT1) was obtained with a glycine to arginine substitution at amino acid 401, resulting in the loss of RFC function. PT1 cells were resistant to PT632 (178-fold), methotrexate (4-fold), and ZD1694 (Tomudex, raltitrexed; 20-fold), but were 3-fold collaterally sensitive to pemetrexed when grown in 25 nmol/L of 5-formyltetrahydrofolate. PT1 cells transfected with wild-type RFC had antifolate sensitivities comparable to that of wild-type HCT-15 cells, indicating that the RFC mutation was the sole basis for resistance. Folate pools were contracted in PT1 cells by 32% or 60%, as measured by radiolabeling intracellular folates or by an enzyme binding assay, respectively. This was reflected in marked (6.5-fold) collateral sensitivity to trimetrexate. The initial uptake of pemetrexed in PT1 cells was markedly reduced ( approximately 85%) but intracellular pemetrexed levels increased to approximately 60% and approximately 70% to that of wild-type cells after 2 hours and 6 days, respectively. There was increased pemetrexed inhibition of glycinamide ribonucleotide transformylase and, to a lesser extent, thymidylate synthase in PT1 cells growing in 5-formyltetrahydrofolate based on nucleoside protection analyses. Hence, loss of RFC function leads to collateral sensitivity to pemetrexed in HCT-15 cells, likely due to cellular folate pool contraction resulting in partial preservation of pemetrexed polyglutamylation and increased target enzyme inhibition. micro
Insights
Loss of the reduced folate carrier (RFC) function in colon cancer cells unexpectedly increased sensitivity to the antifolate pemetrexed. This finding suggests new therapeutic strategies targeting RFC in cancer treatment.
Area of Science:
- Oncology
- Pharmacology
- Molecular Biology
Background:
- Pemetrexed is a key antifolate drug for mesothelioma and non-small cell lung cancer.
- The reduced folate carrier (RFC) is crucial for antifolate uptake and activity.
- Understanding RFC's role is vital for optimizing pemetrexed efficacy.
Purpose of the Study:
- To investigate the impact of reduced folate carrier (RFC) inactivation on pemetrexed activity in cancer cells.
- To determine the mechanisms underlying altered pemetrexed sensitivity in RFC-deficient cells.
Main Methods:
- Generated RFC-deficient HCT-15 colon cancer cells (PT1 clone) via mutagenesis and selective pressure.
- Assessed cellular sensitivity to various antifolates, including pemetrexed, methotrexate, and trimetrexate.
- Analyzed intracellular folate pools, pemetrexed uptake, and inhibition of target enzymes (glycinamide ribonucleotide transformylase, thymidylate synthase).
Main Results:
- RFC-deficient PT1 cells exhibited resistance to other antifolates but showed collateral sensitivity to pemetrexed (3-fold).
- Loss of RFC function led to contracted intracellular folate pools (32-60%) and increased sensitivity to trimetrexate (6.5-fold).
- Despite reduced initial uptake, intracellular pemetrexed levels increased over time in PT1 cells, enhancing inhibition of target enzymes.
Conclusions:
- Inactivation of the reduced folate carrier (RFC) results in collateral sensitivity to pemetrexed in HCT-15 colon cancer cells.
- This sensitivity is likely mediated by folate pool contraction, promoting pemetrexed polyglutamylation and increased target enzyme inhibition.
- These findings offer novel insights into pemetrexed's mechanism of action and potential therapeutic applications in RFC-altered cancers.

