Structure and binding kinetics of three different human CD1d-alpha-galactosylceramide-specific T cell receptors
Stephan D Gadola1, Michael Koch, Jon Marles-Wright
1Department of Rheumathology and Clinical Immunology, University of Bern, Inselspital, Berne CH-3010, Switzerland. stephan.gadola@insel.ch
Abstract:
Invariant human TCR Valpha24-Jalpha18+/Vbeta11+ NKT cells (iNKT) are restricted by CD1d-alpha-glycosylceramides. We analyzed crystal structures and binding characteristics for an iNKT TCR plus two CD1d-alpha-GalCer-specific Vbeta11+ TCRs that use different TCR Valpha chains. The results were similar to those previously reported for MHC-peptide-specific TCRs, illustrating the versatility of the TCR platform. Docking TCR and CD1d-alpha-GalCer structures provided plausible insights into their interaction. The model supports a diagonal orientation of TCR on CD1d and suggests that complementarity determining region (CDR)3alpha, CDR3beta, and CDR1beta interact with ligands presented by CD1d, whereas CDR2beta binds to the CD1d alpha1 helix. This docking provides an explanation for the dominant usage of Vbeta11 and Vbeta8.2 chains by human and mouse iNKT cells, respectively, for recognition of CD1d-alpha-GalCer.
Insights
Invariant natural killer T (iNKT) cells recognize CD1d-alpha-glycosylceramides. Structural analysis reveals how T cell receptors (TCRs) interact with CD1d-alpha-GalCer, explaining Vbeta chain usage in iNKT cell recognition.
Area of Science:
- Immunology
- Structural Biology
- Biochemistry
Background:
- Invariant natural killer T (iNKT) cells are crucial immune cells restricted by CD1d-alpha-glycosylceramides.
- These cells play a significant role in immune responses, making their recognition mechanisms a key area of study.
Purpose of the Study:
- To analyze the crystal structures and binding characteristics of invariant human T cell receptors (TCRs) with CD1d-alpha-GalCer.
- To elucidate the molecular interactions governing the recognition of CD1d-alpha-GalCer by Vbeta11+ TCRs.
Main Methods:
- Crystal structure analysis of iNKT TCRs in complex with CD1d-alpha-GalCer.
- Computational docking of TCR and CD1d-alpha-GalCer structures to model their interaction.
- Analysis of TCR complementarity determining regions (CDRs) involved in ligand binding.
Main Results:
- Structural analysis revealed similarities to MHC-peptide-specific TCRs, highlighting TCR platform versatility.
- A model suggests a diagonal TCR orientation on CD1d, with specific CDRs interacting with the ligand and CD1d.
- The findings explain the preferential use of Vbeta11 and Vbeta8.2 chains by human and mouse iNKT cells, respectively.
Conclusions:
- The study provides structural insights into the interaction between iNKT cell TCRs and CD1d-alpha-GalCer.
- The proposed model explains the molecular basis for TCR chain usage in iNKT cell recognition of CD1d-alpha-GalCer.
- This work contributes to understanding the fundamental mechanisms of T cell recognition and immune surveillance.
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