Related Experiment Video
Updated: Aug 10, 2026

Visualizing and Quantifying Endonuclease-Based Site-Specific DNA Damage
Published on: August 21, 2021
The radiomimetic enediyne C-1027 induces unusual DNA damage responses to double-strand breaks
Daniel R Kennedy1, Terry A Beerman
1Department of Pharmacology and Therapeutics, Roswell Park Cancer Institute, Buffalo, New York 14263, USA.
Abstract:
Cells lacking the protein kinase ataxia telangiectasia mutated (ATM) have defective responses to DNA double-strand breaks (DSBs), including an inability to activate damage response proteins such as p53. However, we previously showed that cells lacking ATM robustly activate p53 in response to DNA strand breaks induced by the radiomimetic enediyne C-1027. To gain insight into the nature of C-1027-induced ATM-independent damage responses to DNA DSBs, we further examined the molecular mechanisms underlying the cellular response to this unique radiomimetic agent. Like ionizing radiation (IR) and other radiomimetics, breaks induced by C-1027 efficiently activate ATM by phosphorylation at Ser1981, yet unlike other radiomimetics and IR, DNA breaks induced by C-1027 result in normal phosphorylation of p53 and the cell cycle checkpoint kinases (Chk1 and Chk2) in the absence of ATM. In the presence of ATM, but under ATM and Rad3-related kinase (ATR) deficient conditions, C-1027 treatment resulted in a decrease in the level of Chk1 phosphorylation but not in the level of p53 and Chk2 phosphorylation. Only when cells were deficient in both ATM and ATR was there a reduction in the level of phosphorylation of each of these DNA damage response proteins. This reduction was also accompanied by an increased level of cell death in comparison to that of wild-type cells or cells lacking either ATM or ATR. Our findings demonstrate a unique cellular response to C-1027-induced DNA DSBs in that DNA damage response proteins are unaffected by the absence of ATM, as long as ATR is present.
Insights
Cells lacking ataxia telangiectasia mutated (ATM) protein still activate p53 in response to C-1027 DNA breaks. This ATM-independent response relies on ATM and Rad3-related kinase (ATR) presence.
Area of Science:
- Molecular Biology
- Cellular Biology
- DNA Damage Response
Background:
- Ataxia telangiectasia mutated (ATM) is crucial for DNA double-strand break (DSB) repair and activating proteins like p53.
- Cells lacking ATM typically show defective responses to DSBs.
- Previous work indicated ATM-deficient cells activate p53 upon exposure to the radiomimetic C-1027.
Purpose of the Study:
- To investigate the molecular mechanisms behind C-1027-induced ATM-independent DNA DSB responses.
- To understand how C-1027 uniquely triggers DNA damage signaling pathways.
Main Methods:
- Utilized cell lines with deficiencies in ATM and/or ATM and Rad3-related kinase (ATR).
- Exposed cells to the radiomimetic C-1027 and ionizing radiation (IR).
- Assessed phosphorylation levels of p53, Chk1, and Chk2 as indicators of DNA damage response activation.
Main Results:
- C-1027 induced DNA breaks activated ATM phosphorylation, similar to IR.
- Unlike IR, C-1027-induced breaks led to normal p53, Chk1, and Chk2 phosphorylation in ATM-deficient cells.
- In ATM-deficient cells, ATR deficiency reduced Chk1 phosphorylation, while combined ATM and ATR deficiency reduced p53, Chk1, and Chk2 phosphorylation, increasing cell death.
Conclusions:
- C-1027 induces a unique DNA DSB response where ATM is not required for p53, Chk1, and Chk2 phosphorylation as long as ATR is present.
- The presence of ATR is critical for maintaining normal DNA damage signaling in the absence of ATM following C-1027 exposure.
- This highlights a distinct pathway for managing C-1027-induced DNA damage, potentially offering new therapeutic insights.
Related Concept Videos
Spontaneous and Induced Mutations
Other Unique Bacteria
Fixing Double-strand Breaks
Nucleotide Excision Repair
Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...
Nucleotide Excision Repair
Nucleotide Excision Repair

