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Updated: Aug 9, 2026

CD Spectroscopy to Study DNA-Protein Interactions
Published on: February 10, 2022
mAMSA resistant human topoisomerase IIbeta mutation G465D has reduced ATP hydrolysis activity
Kathryn L Gilroy1, Chrysoula Leontiou, Kay Padget
1The Institute for Cell and Molecular Biosciences, The University of Newcastle upon Tyne, Framlington Place, Newcastle upon Tyne, NE2 4HH, UK.
Abstract:
Type II Human DNA Topoisomerases (topos II) play an essential role in DNA replication and transcription and are important targets for cancer chemotherapeutic drugs. Topoisomerase II causes transient double-strand breaks in DNA, forming a gate through which another double helix is passed, and acts as a DNA dependent ATPase. Mutations in topoII have been linked to atypical multi-drug resistance. Both human Topoisomerase II isoforms, alpha and beta, are targeted by amsacrine. We have used a forced molecular evolution approach to identify mutations conferring resistance to acridines. Here we report mutation betaG465D, which was selected with mAMSA and DACA and is cross-resistant to etoposide, ellipticine and doxorubicin. Resistance to mAMSA appears to decrease over time indicating a previously unreported resistance mechanism. G465D lies within the B' domain in the region that contacts the cleaved gate helix. There is a 3-fold decrease in ATP affinity and ATP hydrolysis and an altered requirement for magnesium in decatenation assays. The decatenation rate is decreased for the mutated G465D protein. And we report for the first time the use of fluorescence anisotropy with intact human topoisomerase II.
Insights
Researchers identified a new mutation (betaG465D) in human Topoisomerase II, conferring resistance to cancer drugs. This finding sheds light on multi-drug resistance mechanisms and offers new avenues for therapeutic development.
Area of Science:
- Molecular Biology
- Biochemistry
- Genetics
Background:
- Type II Human DNA Topoisomerases (Topos II) are crucial for DNA replication and transcription.
- Topos II are key targets for cancer chemotherapy due to their role in DNA damage.
- Mutations in Topo II can lead to multi-drug resistance in cancer treatment.
Purpose of the Study:
- To identify mutations conferring resistance to acridine-based chemotherapy drugs using forced molecular evolution.
- To characterize the functional impact of novel mutations on Topoisomerase II activity and drug response.
Main Methods:
- Forced molecular evolution to select for drug-resistant Topoisomerase II variants.
- Biochemical assays to measure ATP affinity, ATP hydrolysis, and DNA decatenation rates.
- Fluorescence anisotropy technique used with intact human Topoisomerase II for the first time.
Main Results:
- A novel mutation, betaG465D, was identified and confers cross-resistance to multiple chemotherapy drugs including etoposide, ellipticine, and doxorubicin.
- The betaG465D mutation significantly decreases ATP affinity and hydrolysis, and alters magnesium requirements for decatenation.
- A time-dependent decrease in resistance to mAMSA suggests an uncharacterized resistance mechanism.
Conclusions:
- The betaG465D mutation in Topoisomerase II provides insights into drug resistance mechanisms.
- Understanding these mutations can inform the development of more effective cancer chemotherapeutics.
- Novel resistance mechanisms may emerge over time, necessitating continuous research in cancer drug development.
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