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Whole Genome Sequencing of Candida glabrata for Detection of Markers of Antifungal Drug Resistance
Published on: December 28, 2017
Overexpression of Candida albicans CDR1, CDR2, or MDR1 does not produce significant changes in echinocandin
1Department of Oral Sciences, University of Otago, P.O. Box 647, 310 Great King Street, Dunedin, New Zealand.
Abstract:
The micafungin and caspofungin susceptibilities of Candida albicans laboratory and clinical isolates and of Saccharomyces cerevisiae strains stably hyperexpressing fungal ATP-binding cassette (ABC) or major facilitator superfamily (MFS) transporters involved in azole resistance were determined using three separate methods. Yeast strains hyperexpressing individual alleles of ABC transporters or an MFS transporter from C. albicans gave the expected resistance profiles for the azoles fluconazole, itraconazole, and voriconazole. The strains hyperexpressing CDR2 showed slightly decreased susceptibility to caspofungin in agar plate drug resistance assays, as previously reported, but increased susceptibility to micafungin compared with either the strains hyperexpressing CDR1 or the null parent deleted of seven ABC transporters. The strains hyperexpressing CDR1 showed slightly decreased susceptibility to micafungin in these assays. A C. albicans clinical isolate overexpressing both Cdr1p and Cdr2p relative to its azole-sensitive isogenic progenitor acquired resistance to azole drugs and showed reduced susceptibility to caspofungin and slightly increased susceptibility to micafungin in agar plate drug resistance assays. None of the strains showed significant resistance to micafungin or caspofungin in liquid microdilution susceptibility assays. The antifungal activities of micafungin and caspofungin were similar in agarose diffusion assays, although the shape and size of the caspofungin inhibitory zones were affected by medium composition. The assessment of micafungin and caspofungin potency is therefore assay dependent; the differences seen with agar plate drug resistance assays occur over narrow ranges of echinocandin concentrations and are not of clinical significance.
Insights
Echinocandin antifungal susceptibility testing for Candida albicans and Saccharomyces cerevisiae revealed assay-dependent results. Micafungin and caspofungin showed similar antifungal activity, with no significant clinical resistance observed.
Area of Science:
- Medical Mycology
- Antifungal Drug Discovery
- Molecular Biology
Background:
- Azole resistance in Candida albicans is often mediated by ATP-binding cassette (ABC) or major facilitator superfamily (MFS) transporters.
- Understanding the impact of these transporters on echinocandin susceptibility is crucial for effective antifungal therapy.
Purpose of the Study:
- To determine the susceptibility of Candida albicans and Saccharomyces cerevisiae strains to micafungin and caspofungin.
- To investigate the influence of specific ABC and MFS transporters on echinocandin susceptibility.
Main Methods:
- Susceptibility testing using three methods: agar plate drug resistance assays, liquid microdilution, and agarose diffusion assays.
- Utilizing yeast strains engineered to overexpress specific fungal transporters involved in azole resistance.
Main Results:
- Yeast strains overexpressing azole resistance transporters showed expected azole resistance profiles.
- Agar plate assays indicated minor changes in susceptibility to micafungin and caspofungin, but liquid microdilution assays showed no significant resistance.
- Antifungal activity of micafungin and caspofungin was similar across methods, though zone sizes varied with medium composition.
Conclusions:
- Echinocandin susceptibility assessment is assay-dependent, with observed differences not being clinically significant.
- Micafungin and caspofungin demonstrate comparable antifungal activity against the tested strains.
- Fungal transporter overexpression primarily impacts azole resistance, with limited effect on echinocandin susceptibility in clinically relevant assays.
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