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Updated: Aug 9, 2026

Using RNA-sequencing to Detect Novel Splice Variants Related to Drug Resistance in In Vitro Cancer Models
Published on: December 9, 2016
Targeting the RNA splicing machinery as a novel treatment strategy for pancreatic carcinoma
Gregory M Hayes1, Patricia E Carrigan, Alison M Beck
1Mayo Clinic Cancer Center and Department of Molecular Pharmacology and Experimental Therapeutics, 13400 East Shea Boulevard, Scottsdale, AZ 85259, USA.
Abstract:
Aberrant patterns of pre-mRNA splicing have been established for many human malignancies, yet the mechanisms responsible for these tumor-specific changes remain undefined and represent a promising area for therapeutic intervention. Using immunohistochemistry, we have localized the expression of a central splicing regulator, serine-arginine protein kinase 1 (SRPK1), to the ductular epithelial cells within human pancreas and have further shown its increased expression in tumors of the pancreas, breast, and colon. Small interfering RNA-mediated down-regulation of SRPK1 in pancreatic tumor cell lines resulted in a dose-dependent decrease in proliferative capacity and increase in apoptotic potential. Coordinately, the disruption of SRPK1 expression resulted in enhanced sensitivity of tumor cells to killing by gemcitabine and/or cisplatin. A dose-dependent reduction in the phosphorylation status of specific SR proteins was detected following the down-regulation of SRPK1 and is likely responsible for the observed alterations in expression of proteins associated with apoptosis and multidrug resistance. These data support SRPK1 as a new, potential target for the treatment of pancreatic ductular cancer that at present remains largely unresponsive to conventional therapies. Furthermore, these results support the development of innovative therapies that target not only specific splice variants arising during tumorigenesis but also the splice regulatory machinery that itself may be abnormal in malignant cells.
Insights
Aberrant splicing in cancer is linked to serine-arginine protein kinase 1 (SRPK1). Inhibiting SRPK1 in pancreatic cancer cells reduces proliferation and increases sensitivity to chemotherapy, suggesting SRPK1 as a therapeutic target.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Therapeutics
Background:
- Aberrant pre-mRNA splicing is a hallmark of human malignancies, but the underlying mechanisms driving these tumor-specific changes are not fully understood.
- Altered splicing represents a potential therapeutic target in cancer treatment.
- Serine-arginine protein kinase 1 (SRPK1) is a key regulator of splicing.
Purpose of the Study:
- To investigate the role of SRPK1 in pancreatic ductular cancer.
- To determine if SRPK1 is a viable therapeutic target for pancreatic cancer.
Main Methods:
- Immunohistochemistry was used to localize SRPK1 expression in human pancreas and tumors.
- Small interfering RNA (siRNA) was used to down-regulate SRPK1 expression in pancreatic cancer cell lines.
- Cell proliferation, apoptosis, and sensitivity to gemcitabine/cisplatin were assessed.
- Phosphorylation status of SR proteins was analyzed.
Main Results:
- SRPK1 was found to be overexpressed in pancreatic, breast, and colon tumors.
- Down-regulation of SRPK1 in pancreatic cancer cells decreased proliferation and increased apoptosis.
- SRPK1 inhibition enhanced sensitivity to gemcitabine and cisplatin.
- Reduced SRPK1 levels led to decreased phosphorylation of SR proteins, impacting apoptosis and multidrug resistance proteins.
Conclusions:
- SRPK1 is a promising therapeutic target for pancreatic ductular cancer.
- Targeting SRPK1 may overcome resistance to conventional therapies.
- Innovative therapies targeting aberrant splicing machinery are warranted for cancer treatment.
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