Bacteriochlorophyll electronic transition moment directions in bacteriochlorophyll a-protein

The low-temperature 800-nm band absorption and circular dichroism spectra of the bacteriochlorophyll (Bchl) a-protein from Prosthecochloris aestuarii strain 2K are analyzed theoretically. These spectra show considerable structure that is attributed primarily to resonance (exciton) interactions among the lowest singlet transitions of the Bchl a molecules contained in each protein. We calculate these spectra from the known arrangement of the Bchl molecules in the protein. With the conventional assignment of the lowest singlet transition of Bchl a as Q(y) (y-polarized), agreement of calculated spectra with experiment is poor. All of our attempts, based on this conventional assignment, to improve the theoretical fits to absorption and circular dichroism spectra simultaneously are unsuccessful. However, by making the simple but unconventional assumption that the lowest singlet transition in each of the Bchl a molecules in each protein is x-polarized rather than y-polarized, we find good agreement between calculated and observed spectra. If these results are not fortuitous, they indicate that there is a systematic error in the protein structural model, that the conventional assignments of Bchl a transitions are incorrect, or that the protein environment provides a sufficiently strong perturbation to rotate the lowest singlet transition moment direction by approximately 90 degrees , presumably by changing the order of certain of the Bchl a orbitals.