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A functional polymorphism in MMP-9 is associated with childhood atopic asthma.
Kazuko Nakashima1, Tomomitsu Hirota, Kazuhiko Obara
1Laboratory for Genetics of Allergic Diseases, SNP Research Center, The Institute of Physical and Chemical Research (RIKEN), Kanagawa 230-0045, Japan.
Biochemical and Biophysical Research Communications
|April 25, 2006
Summary
Genetic variations in the matrix metalloproteinase-9 (MMP-9) gene are linked to childhood atopic asthma. Specific MMP-9 polymorphisms significantly increase the risk of developing asthma in children.
Area of Science:
- Genetics
- Immunology
- Respiratory Medicine
Background:
- Matrix metalloproteinase-9 (MMP-9) plays a role in inflammation and tissue remodeling, processes implicated in asthma.
- The specific genetic influences of MMP-9 polymorphisms on asthma development remain largely uncharacterized.
Purpose of the Study:
- To investigate the association between MMP-9 gene polymorphisms and the risk of childhood atopic asthma.
- To explore the functional impact of identified polymorphisms on MMP-9 gene expression.
Main Methods:
- An association study was conducted involving 290 children with asthma and 638 controls.
- Seventeen MMP-9 polymorphisms were identified and analyzed, including haplotype analysis.
- MMP-9 expression in human bronchial epithelial cells was examined, and the effect of a promoter single nucleotide polymorphism (SNP) on transcriptional activity was assessed.
Main Results:
- Two specific MMP-9 polymorphisms, 2127G>T and 5546G>A (R668Q), showed a significant association with increased risk of childhood atopic asthma (p = 0.0032 and p = 0.0016, respectively).
- Haplotype analysis also revealed a significant positive association (p = 0.0053).
- The promoter SNP -1590C>T, in linkage disequilibrium with 2127G>T, was found to enhance MMP-9 transcriptional levels, and MMP-9 mRNA expression was upregulated by dsRNA in bronchial epithelial cells.
Conclusions:
- Functional genetic polymorphisms in the MMP-9 gene are associated with the risk of developing childhood atopic asthma.
- These findings suggest that MMP-9 genetic variations may contribute to asthma pathogenesis.