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Updated: Jul 23, 2026

Preparation of Cell-lines for Conditional Knockdown of Gene Expression and Measurement of the Knockdown Effects on E4orf4-Induced Cell Death
Published on: October 21, 2012
Knockdown of Sox4 expression by RNAi induces apoptosis in ACC3 cells
P Pramoonjago1, A S Baras, C A Moskaluk
1Department of Pathology and Biochemistry, University of Virginia, Charlottesville, VA 22908, USA.
Abstract:
Microarray RNA gene expression profiling analysis has shown that Sox4 (Sry-related high mobility group (HMG) box 4) is one of the most upregulated genes in adenoid cystic carcinoma (ACC), relative to non-neoplastic tissue of origin. Here, we show that Sox4 protein is similarly upregulated in ACC by immunohistochemistry of 28 primary cancers and 20 normal tissues. To elucidate the functional significance of these findings, RNA interference (RNAi)-mediated RNA silencing was used to downregulate Sox4 expression in the ACC-derived cell line, ACC3. With confirmed knockdown of Sox4 protein, cell viability was reduced by 51%, with a corresponding increase of apoptosis to 85% as compared to 12% in controls. Apoptosis was confirmed by cell morphology, DNA fragmentation and flow cytometry. Cells could be rescued from the proapoptotic effects of Sox4 RNAi by co-transfection with a construct expressing functional Sox4. Microarray gene expression profiling of RNAi knockdown experiments shows that downregulation of Sox4-modulated expression of critical genes involved in apoptosis and cell cycle control. Overall, our findings suggest that Sox4 contributes to the malignant phenotype of ACC cells by promoting cell survival.
Insights
Sox4 gene expression is elevated in adenoid cystic carcinoma (ACC). Downregulating Sox4 (Sry-related high mobility group box 4) significantly increased apoptosis and reduced cell viability in ACC cells, suggesting Sox4 promotes cancer survival.
Area of Science:
- Oncology
- Molecular Biology
- Gene Expression Analysis
Background:
- Sox4 (Sry-related high mobility group box 4) is significantly upregulated in adenoid cystic carcinoma (ACC) compared to normal tissues.
- Elevated Sox4 expression suggests a potential role in ACC pathogenesis.
Purpose of the Study:
- To investigate the functional significance of Sox4 in ACC.
- To determine if Sox4 contributes to the malignant phenotype of ACC cells.
Main Methods:
- Immunohistochemistry was used to assess Sox4 protein levels in primary ACC tissues and normal controls.
- RNA interference (RNAi) was employed to downregulate Sox4 expression in the ACC3 cell line.
- Microarray gene expression profiling was performed on cells with Sox4 knockdown.
Main Results:
- Sox4 protein was confirmed to be upregulated in ACC tissues.
- Downregulation of Sox4 in ACC3 cells led to a 51% reduction in cell viability and an 85% increase in apoptosis.
- Sox4 knockdown modulated the expression of genes involved in apoptosis and cell cycle control.
- The pro-apoptotic effects of Sox4 knockdown were reversible with Sox4 re-expression.
Conclusions:
- Sox4 plays a crucial role in promoting cell survival in ACC.
- Targeting Sox4 may represent a potential therapeutic strategy for adenoid cystic carcinoma.
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