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Multiple testing. Part I. Single-step procedures for control of general type I error rates.
Sandrine Dudoit1, Mark J van der Laan, Katherine S Pollard
1Division of Biostatistics, School of Public Health, University of California, Berkeley, USA. sandrine@stat.berkeley.edu
Summary
This study introduces novel single-step multiple testing procedures to control various Type I error rates. The method uses test statistics
Area of Science:
- Statistical Methodology
- Multiple Hypothesis Testing
- Computational Statistics
Background:
- Controlling Type I error rates is crucial in multiple hypothesis testing to avoid false positives.
- Existing methods often rely on specific assumptions about data distribution or subset pivotality.
- There is a need for flexible procedures that control generalized error rates under broad conditions.
Purpose of the Study:
- To propose general single-step multiple testing procedures for controlling arbitrary Type I error rate parameters.
- To introduce a novel approach utilizing the null distribution of test statistics rather than the data generating distribution.
- To develop methods that offer asymptotic Type I error rate control without stringent distributional assumptions.
Main Methods:
- Development of single-step procedures based on the null distribution of test statistics to derive cut-offs and adjusted p-values.
- Identification of an asymptotic domination condition for null distributions ensuring Type I error rate control.
- Proposal of an explicit null distribution based on the asymptotic distribution of scaled and shifted test statistics.
- Utilization of a general bootstrap algorithm for obtaining consistent estimators of the null distribution.
Main Results:
- The proposed procedures asymptotically control Type I error rates for general null hypotheses and arbitrary data generating distributions.
- In the context of family-wise error rate (FWER) control, the method yields single-step minP and maxT procedures.
- Single-step procedures employing consistent null distribution estimators demonstrate asymptotic Type I error rate control.
- The approach is validated through simulation studies and applied to genomic data.
Conclusions:
- The proposed single-step multiple testing framework offers a flexible and robust approach to error rate control.
- The use of test statistics' null distribution provides a powerful alternative to traditional methods.
- The bootstrap algorithm facilitates practical implementation of these advanced statistical procedures.