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Genome-wide Protein-protein Interaction Screening by Protein-fragment Complementation Assay (PCA) in Living Cells
Published on: March 3, 2015
Functional complementation of the yeast P-type H-ATPase, PMA1, by the Pneumocystis carinii P-type H-ATPase, PCA1
Daniela Grigore1, John C Meade
1Department of Microbiology, University of Mississippi Medical Center, Jackson, 39216-4505, USA.
Abstract:
The opportunistic fungus Pneumocystis is the etiologic agent of an interstitial plasma cell pneumonia that primarily afflicts immunocompromised individuals. Like other fungi Pneumocystis maintains a H(+) plasma membrane gradient to drive nutrient uptake and regulates intracellular pH by ATP-dependent proton efflux. Previously, we identified a Pneumocystis gene, PCA1, whose predicted protein product was homologous to fungal proton pumps. In this study, we show by functional complementation in a Saccharomyces strain whose endogenous PMA1 proton pump activity is repressed that the Pneumocystis PCA1 encodes a H(+)-ATPase. The properties of PCA1 characterized in this system closely resemble those of yeast PMA1. Yeast expressing PCA1 grow at low pH and are able to acidify the external media. Maximal enzyme activity (V(max)) and efficiency of substrate utilization (K(m)) in plasma membranes were nearly identical for PCA1 and PMA1. PCA1 contains an inhibitory COOH-terminal domain; removal of the final 40 amino acids significantly increased V(max) and growth at pH 6.5. PCA1 activity was inhibited by proton pump inhibitors omeprazole and lansoprazole, but was unaffected by H(+)/K(+)-ATPase inhibitor SCH28080. Thus, H(+) homeostasis in Pneumocystis is likely regulated as in other fungi. This work also establishes a system for screening PCA1 inhibitors to identify new anti-Pneumocystis agents.
Insights
Pneumocystis PCA1 encodes a H(+)-ATPase, crucial for nutrient uptake and pH regulation in fungi. This study establishes a system for screening PCA1 inhibitors to develop new anti-Pneumocystis therapies.
Area of Science:
- Mycology
- Molecular Biology
- Biochemistry
Background:
- Pneumocystis causes pneumonia in immunocompromised individuals.
- Fungi use H(+) gradients for nutrient uptake and pH regulation.
- The Pneumocystis PCA1 gene product is homologous to fungal proton pumps.
Purpose of the Study:
- To functionally characterize the Pneumocystis PCA1 gene product.
- To determine if PCA1 encodes a H(+)-ATPase.
- To establish a system for screening PCA1 inhibitors.
Main Methods:
- Functional complementation in Saccharomyces cerevisiae.
- Characterization of enzyme kinetics (Vmax, Km).
- Assessment of growth at low pH and external media acidification.
Main Results:
- Pneumocystis PCA1 encodes a functional H(+)-ATPase, similar to yeast PMA1.
- PCA1 activity is regulated by a COOH-terminal inhibitory domain.
- PCA1 is inhibited by omeprazole and lansoprazole, but not SCH28080.
Conclusions:
- Pneumocystis utilizes a H(+)-ATPase for cellular homeostasis, similar to other fungi.
- The PCA1 gene and its functional characterization provide a target for anti-Pneumocystis drug development.
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