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On plotting species abundance distributions.
John S Gray1, Anders Bjørgesaeter, Karl I Ugland
1Marine Biodiversity Research Group, Department of Biology, University of Oslo, PB 1066 Blindern, 0316 Oslo, Norway.
The Journal of Animal Ecology
|May 13, 2006
Summary
Binning methods significantly impact species abundance distribution (SAD) model fitting. Using exact methods avoids binning errors, offering more accurate ecological insights into species diversity.
Area of Science:
- Ecology
- Biodiversity Science
- Statistical Ecology
Background:
- Species abundance distribution (SAD) models are crucial for understanding biodiversity.
- Recent interest in SAD models was spurred by claims of log-normal distribution underestimating rare species.
- The neutral Zero Sum Multinomial (ZSM) distribution was developed to better fit observed species-rich assemblage data.
Purpose of the Study:
- To investigate the impact of different binning methods on the visualization and statistical fitting of SAD models.
- To evaluate the consistency of model fits across various binning strategies using empirical data.
Main Methods:
- Six distinct binning methods were applied to the Barro Colorado Island (BCI) tropical tree data for plotting SADs.
- Visual comparison of SAD curve shapes generated by different binning techniques.
- Assessment of how binning affects the goodness-of-fit for ZSM and log-normal models.
Main Results:
- Different binning methods produced markedly different SAD curve appearances for the same dataset.
- The choice of binning method influenced the statistical fit of SAD models, including ZSM and log-normal distributions.
- No universally agreed-upon binning method for SAD plots currently exists.
Conclusions:
- Binning introduces variability and potential errors in SAD analysis, affecting model evaluation.
- A simple doubling method for binning is suggested for illustrative purposes, or rank-abundance plots should be considered.
- Exact methods for model fitting and testing, which bypass data binning, are recommended to avoid unnecessary errors and improve accuracy.