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Ca2+ indicators based on computationally redesigned calmodulin-peptide pairs.

Amy E Palmer1, Marta Giacomello, Tanja Kortemme

  • 1Department of Pharmacology and Howard Hughes Medical Institute, University of California, San Diego, 9500 Gilman Drive, La Jolla, California 92093, USA.

Chemistry & Biology
|May 25, 2006
PubMed
Summary
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Researchers engineered new calcium indicators (cameleons) by redesigning protein interfaces. These improved cameleons offer enhanced sensitivity and specificity for sensing calcium ions (Ca2+) across various cellular locations.

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Genetics

Background:

  • Calmodulin (CaM) is a crucial calcium-binding protein involved in cellular signaling.
  • Genetically encoded calcium indicators (cameleons) are vital tools for monitoring intracellular Ca2+ dynamics.
  • Previous cameleon generations faced limitations with native CaM interference and sensitivity ranges.

Purpose of the Study:

  • To reengineer the calmodulin-binding interface for improved Ca2+ sensing.
  • To develop a new generation of cameleons with enhanced specificity and sensitivity.
  • To broaden the dynamic range and applicability of cameleons in diverse subcellular compartments.

Main Methods:

  • Computational design of complementary "bumps and holes" at the calmodulin-binding interface.

Related Experiment Videos

  • Creation of mutant calmodulin and calmodulin-binding peptides.
  • Generation of genetically encoded calcium indicators (cameleons) incorporating redesigned proteins.
  • Testing Ca2+ sensitivity and dynamic range, including comparisons with native calmodulin.
  • Main Results:

    • Successfully reengineered calmodulin-binding interfaces, creating sensitive and specific mutant protein pairs.
    • Developed second-generation cameleons insensitive to excess native calmodulin.
    • Achieved a 100-fold tunable Ca2+ sensitivity range (0.6–160 µM).
    • Incorporating circularly permuted Venus increased the dynamic range 3- to 5-fold.

    Conclusions:

    • Redesigned cameleons represent a significant advancement in Ca2+ indicator technology.
    • These improved indicators offer greater precision for monitoring Ca2+ in cytoplasm and specific organelles.
    • The enhanced cameleons facilitate more accurate cellular Ca2+ signaling studies in various biological contexts.