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Published on: March 29, 2012
Intergeneric relationship between the Aspergillus ochraceous virus F and the Penicillium stoloniferum virus S
Jong Wook Kim1, Eun Young Choi, Young Tae Kim
1Department of Biochemistry, College of Medicine, Inha University, Incheon 402-751, South Korea. jwkim@inha.ac.kr
Abstract:
It was reported that the "slow" component (PsV-S) of Penicillium stoloniferum virus complex also occurred in a second genus, Aspergillus ochraceous. The responsible virus for this intergeneric occurrence was considered to be the "fast" component (AoV-F) of A. ochraceous virus complex. In this investigation, AoV dsRNA 1, that was previously shown to cross-hybridize with PsV-S dsRNA, has been cloned. It was 1754 bp in length and contained one open reading frame of 539 amino acids (p63), had the same genome organization as PsV-S dsRNA S1 and also had the conserved sequence motif of the PsV-S dsRNAs (5'-GCGCAAAA-3') at the 5' terminus. A BLAST search indicated that p63 was a putative dsRNA-dependent RNA polymerase (RdRp), had 81% of sequence homology to members of the genus Partitivirus, and grouped together with PsV-S in phylogenetic analysis. But immunoblot analysis showed that the capsid protein (P3) of AoV-F virus component did not reacted against PsV-S antiserum. These evidences suggest that the cross serological relationship between AoV-F and PsV-S previously observed may have been due to the RdRps of the respective viruses rather than between their respective capsid proteins as was assumed in 1985.
Insights
The Aspergillus ochraceous virus (AoV-F) fast component, previously thought to be related to Penicillium stoloniferum virus (PsV-S) via capsid proteins, is actually related through its RNA-dependent RNA polymerase (RdRp). This finding clarifies intergeneric virus relationships.
Area of Science:
- Virology
- Molecular Biology
- Mycology
Background:
- The "slow" component of Penicillium stoloniferum virus (PsV-S) was previously observed in Aspergillus ochraceous, attributed to the "fast" component of Aspergillus ochraceous virus (AoV-F).
- This intergeneric occurrence suggested a serological relationship between AoV-F and PsV-S, assumed to be between their capsid proteins.
Purpose of the Study:
- To investigate the molecular basis of the cross-serological relationship between AoV-F and PsV-S.
- To characterize the genome organization and protein products of AoV dsRNA 1.
Main Methods:
- Cloning and sequencing of AoV dsRNA 1.
- Bioinformatic analysis including BLAST searches and phylogenetic analysis.
- Immunoblot analysis using antiserum against PsV-S.
Main Results:
- AoV dsRNA 1 (1754 bp) encodes a putative RNA-dependent RNA polymerase (RdRp, p63) with 81% homology to Partitivirus members.
- Phylogenetic analysis grouped AoV-F with PsV-S.
- Immunoblot analysis showed no cross-reactivity between AoV-F capsid protein (P3) and PsV-S antiserum.
Conclusions:
- The previously observed cross-serological relationship between AoV-F and PsV-S is likely due to homology between their respective RNA-dependent RNA polymerases (RdRps), not their capsid proteins.
- This study revises the understanding of intergeneric virus relationships and the mechanisms of cross-serological reactions.
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