Related Experiment Video
Updated: Aug 5, 2026

07:55
A Deep-sequencing-assisted, Spontaneous Suppressor Screen in the Fission Yeast Schizosaccharomyces pombe
Published on: March 7, 2019
Mutations in yeast mt tRNAs: specific and general suppression by nuclear encoded tRNA interactors
C De Luca1, C Besagni, L Frontali
1Department of Cell and Developmental Biology, Pasteur Institute-Cenci Bolognetti Foundation, University of Rome I, Italy.
Gene
|June 17, 2006
Summary
Mitochondrial tRNA mutations cause respiratory defects, linked to neurodegenerative diseases. Yeast studies reveal nuclear gene TUF1 can rescue these defects, with effects varying by yeast strain.
Area of Science:
- Mitochondrial genetics
- Molecular biology
- Neurodegenerative disease research
Background:
- Mutations in mitochondrial tRNA genes lead to impaired protein synthesis and respiratory defects.
- These defects are implicated in human neurodegenerative diseases.
- Yeast models offer a viable system to study these mitochondrial defects.
Purpose of the Study:
- To investigate nuclear genes that can rescue mitochondrial tRNA mutation-induced defects.
- To explore the role of mitochondrial translation elongation factor EF-Tu (TUF1) in mitigating these defects.
- To understand the influence of the nuclear genetic background on mitochondrial dysfunction.
Main Methods:
- Studying respiratory-deficient yeast mutants.
- Identifying nuclear-encoded tRNA interactors, including EF-Tu and aminoacyl-tRNA synthetases.
- Analyzing strain-dependent effects of TUF1 over-expression.
- Investigating nuclear background effects by altering genetic context.
- Quantifying TUF1 transcript levels using RT-PCR.
Main Results:
- The mitochondrial protein synthesis elongation factor EF-Tu (TUF1) and specific mt aminoacyl-tRNA synthetases were identified as potential interactors.
- The efficacy of TUF1 over-expression in rescuing respiratory defects was found to be highly strain-dependent.
- Significant variations in TUF1 transcript levels were observed between strains with functional and dysfunctional mitochondria.
Conclusions:
- Nuclear gene TUF1 plays a role in mitigating mitochondrial tRNA mutation-induced defects.
- The genetic background significantly influences the expression and outcome of mitochondrial mutations.
- Transcriptional variability of TUF1 correlates with mitochondrial function, suggesting a regulatory role.
Related Concept Videos
Translation
Lesson: Translation
Translation is the process of synthesizing proteins from the genetic information carried by messenger RNA (mRNA). Following transcription, it constitutes the final step in the expression of genes. This process is carried out by ribosomes, complexes of protein and specialized RNA molecules. Ribosomes, transfer RNA (tRNA), and other proteins produce a chain of amino acids—the polypeptide—as the end product of translation.
Translation Produces the Building Blocks of Life
Translation is the process of synthesizing proteins from the genetic information carried by messenger RNA (mRNA). Following transcription, it constitutes the final step in the expression of genes. This process is carried out by ribosomes, complexes of protein and specialized RNA molecules. Ribosomes, transfer RNA (tRNA), and other proteins produce a chain of amino acids—the polypeptide—as the end product of translation.
Translation Produces the Building Blocks of Life
Nuclear Export of mRNA
Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
Nonsense-mediated mRNA Decay
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Eukaryotic Transcription Inhibitors
Certain biochemical processes, such as embryonic development and cell growth regulation, depend on the repression of specific genes. DNA binding proteins known as eukaryotic transcription inhibitors regulate the repression of gene expression in eukaryotes. The presence of these inhibitors at the required location and time in the cell is triggered by the presence of hormones and additional signals from other cells.
Eukaryotic transcription inhibitors usually contain two distinct domains, a DNA...
Eukaryotic transcription inhibitors usually contain two distinct domains, a DNA...
Transcription Attenuation in Prokaryotes
Transcriptional attenuation occurs when RNA transcription is prematurely terminated due to the formation of a terminator mRNA hairpin structure. Bacteria use these hairpins to regulate the transcription process and control the synthesis of several amino acids including histidine, lysine, threonine, and phenylalanine. Transcription attenuation takes place in the non-coding regions of mRNA.
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
Translation
Lesson: Translation
Translation is the process of synthesizing proteins from the genetic information carried by messenger RNA (mRNA). Following transcription, it constitutes the final step in the expression of genes. This process is carried out by ribosomes, complexes of protein and specialized RNA molecules. Ribosomes, transfer RNA (tRNA), and other proteins produce a chain of amino acids—the polypeptide—as the end product of translation.
Translation Produces the Building Blocks of Life
Translation is the process of synthesizing proteins from the genetic information carried by messenger RNA (mRNA). Following transcription, it constitutes the final step in the expression of genes. This process is carried out by ribosomes, complexes of protein and specialized RNA molecules. Ribosomes, transfer RNA (tRNA), and other proteins produce a chain of amino acids—the polypeptide—as the end product of translation.
Translation Produces the Building Blocks of Life

