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Utilizing Functional Genomics Screening to Identify Potentially Novel Drug Targets in Cancer Cell Spheroid Cultures
Published on: December 26, 2016
Functional screen for genes responsible for tamoxifen resistance in human breast cancer cells
Danielle Meijer1, Ton van Agthoven, Peter T Bosma
1Department of Pathology, Josephine Nefkens Institute, Erasmus MC-University Medical Center, Rotterdam, the Netherlands.
Abstract:
Antiestrogens, such as tamoxifen, are widely used for endocrine treatment of estrogen receptor-positive breast cancer. However, as breast cancer progresses, development of tamoxifen resistance is inevitable. The mechanisms underlying this resistance are not well understood. To identify genes involved in tamoxifen resistance, we have developed a rapid screening method. To alter the tamoxifen-sensitive phenotype of human ZR-75-1 breast cancer cells into a tamoxifen-resistant phenotype, the cells were infected with retroviral cDNA libraries derived from human placenta, human brain, and mouse embryo. Subsequently, the cells were selected for proliferation in the presence of 4-hydroxy-tamoxifen (OH-TAM) and integrated cDNAs were identified by sequence similarity searches. From 155 OH-TAM-resistant cell colonies, a total of 25 candidate genes were isolated. Seven of these genes were identified in multiple cell colonies and thus cause antiestrogen resistance. The epidermal growth factor receptor, platelet-derived growth factor receptor-alpha, platelet-derived growth factor receptor-beta, colony-stimulating factor 1 receptor, neuregulin1, and fibroblast growth factor 17 that we have identified have been described as key regulators in the mitogen-activated protein kinase pathway. Therefore, this pathway could be a valuable target in the treatment of patients with breast cancer resistant to endocrine treatment. In addition, the putative gene LOC400500, predicted by in silico analysis, was identified. We showed that ectopic expression of this gene, designated as breast cancer antiestrogen resistance 4 (BCAR4), caused OH-TAM resistance and anchorage-independent cell growth in ZR-75-1 cells and that the intact open reading frame was required for its function. We conclude that retroviral transfer of cDNA libraries into human breast cancer cells is an efficient method for identifying genes involved in tamoxifen resistance.
Insights
Researchers identified genes driving tamoxifen resistance in breast cancer using a novel screening method. They discovered that activating the mitogen-activated protein kinase pathway and the BCAR4 gene contribute to endocrine therapy resistance.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Antiestrogens like tamoxifen are crucial for estrogen receptor-positive breast cancer treatment.
- Tamoxifen resistance is a significant challenge in advanced breast cancer, with underlying mechanisms requiring further elucidation.
- Understanding tamoxifen resistance mechanisms is vital for developing effective therapeutic strategies.
Purpose of the Study:
- To identify novel genes involved in the development of tamoxifen resistance in breast cancer.
- To develop and utilize a rapid screening method for discovering resistance-associated genes.
- To investigate the role of identified genes in conferring resistance to antiestrogen therapy.
Main Methods:
- Utilized retroviral cDNA libraries from human and mouse sources to infect tamoxifen-sensitive human breast cancer cells (ZR-75-1).
- Selected infected cells for proliferation in the presence of 4-hydroxy-tamoxifen (OH-TAM) to isolate resistant phenotypes.
- Identified integrated cDNAs via sequence similarity searches and validated candidate genes through ectopic expression studies.
Main Results:
- Isolated 25 candidate genes from 155 resistant cell colonies, with seven genes consistently identified.
- Identified key regulators of the mitogen-activated protein kinase (MAPK) pathway, including EGFR, PDGFRA, PDGFRB, CSF1R, NRG1, and FGF17, as contributors to resistance.
- Discovered and validated a novel gene, BCAR4 (breast cancer antiestrogen resistance 4), which confers OH-TAM resistance and promotes anchorage-independent growth.
Conclusions:
- Retroviral cDNA library screening is an effective method for identifying genes associated with tamoxifen resistance in breast cancer.
- The MAPK pathway and BCAR4 are critical players in the development of endocrine resistance.
- Targeting the MAPK pathway and BCAR4 may offer new therapeutic avenues for tamoxifen-resistant breast cancer.
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