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Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins
Published on: August 9, 2019
DNA and RNA aptamers as modulators of protein function
1Department of Biochemistry, Instituto de Química, Universidade de São Paulo, Caixa Postal 26077, São Paulo 05513-970, Brazil. henning@iq.usp.br
Medicinal Chemistry (Shariqah (United Arab Emirates))
|June 22, 2006
Summary
Systematic evolution of ligands by exponential enrichment (SELEX) generates aptamers, which are DNA or RNA molecules that bind targets with high affinity. These synthetic antibodies show promise in diagnostics, therapeutics, and in vivo applications.
Area of Science:
- Biochemistry
- Molecular Biology
- Biotechnology
Background:
- Systematic evolution of ligands by exponential enrichment (SELEX) is a method for discovering nucleic acid ligands.
- Aptamers are DNA or RNA molecules isolated via SELEX that bind targets with high affinity and specificity.
- Aptamers function similarly to antibodies and are termed synthetic antibodies.
Purpose of the Study:
- To review the evolution and applications of SELEX technology and aptamer development.
- To highlight the expanding range of targets for aptamer selection.
- To discuss the therapeutic and diagnostic potential of aptamers, including in vivo applications.
Main Methods:
- SELEX involves iterative cycles of selection, amplification, and sequencing to isolate high-affinity aptamers.
- Chemical modifications enhance aptamer stability against enzymatic degradation for in vivo use.
- In vitro selection methods have been extended to complex targets like cell surface receptors and whole cells.
Main Results:
- SELEX has successfully identified aptamers for a wide array of targets, including proteins, small molecules, receptors, and cells.
- Aptamers demonstrate high affinity and specificity comparable to antibodies.
- Chemically modified aptamers show enhanced stability and utility in biological systems.
- Aptamers have shown promise in preclinical animal models and clinical trials for therapeutic and diagnostic applications.
Conclusions:
- SELEX is a powerful technology for generating aptamers with diverse applications in medicine and research.
- Aptamers offer a promising alternative to antibodies for diagnostics and therapeutics.
- Further development and clinical validation are ongoing for aptamer-based applications.
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