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Updated: Aug 7, 2026

Single-Cell Analysis of the Expression of Pseudomonas syringae Genes within the Plant Tissue
Published on: October 6, 2022
Surprising niche for the plant pathogen Pseudomonas syringae
Cindy E Morris1, Linda L Kinkel, Kun Xiao
1INRA, Unité de Pathologie Végétale, BP 94, 84140 Montfavet, France. cindy.morris@avignon.inra.fr
Plant pathogenic bacteria like Pseudomonas syringae can survive in river biofilms, not just agricultural settings. This discovery impacts understanding of their spread and evolution.
Area of Science:
- Environmental microbiology
- Plant pathology
- Bacterial ecology
Background:
- Plant pathogenic bacteria are primarily studied in agricultural contexts.
- Human pathogens' environmental niches are well-known, unlike those of plant pathogens.
- Environmental survival traits can inform virulence factors in human pathogens.
Purpose of the Study:
- To investigate non-agricultural niches for plant pathogenic bacteria.
- To explore the ecology and evolution of Pseudomonas syringae outside of agricultural settings.
- To assess the potential of environmental habitats as reservoirs for plant pathogens.
Main Methods:
- Isolation of Pseudomonas syringae from river epilithon in France and the USA.
- Testing of isolated strains for plant pathogenicity and toxin production.
- Sequencing of 16S rDNA to determine genetic lineage and distribution.
Main Results:
- Pseudomonas syringae was isolated from river epilithon at high densities, including pristine environments.
- Isolated strains exhibited functional pathogenicity systems and produced syringomycin-like toxins.
- A widespread genetic lineage of P. syringae was identified across continents, suggesting aerosol/precipitation dispersal.
Conclusions:
- Non-agricultural niches, such as river epilithon, are important for plant pathogenic bacteria ecology and evolution.
- Environmental strains possess traits that could enhance pathogenicity and fitness.
- Limited understanding of these niches hinders comprehension of agricultural epidemics and pathogen evolution.
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