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Updated: Jul 29, 2026

Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay (EMSA) and DNA-affinity Precipitation Assay (DAPA)
Published on: August 21, 2016
[Molecular genetic diagnostics and screening of hereditary hemochromatosis]
J Zlocha1, L Kovács, S Pozgayová
1II. detská klinika Lekárskej fakulty UK a Detskej fakultnej nemocnice s poliklinikou, Bratislava, Slovenská republika. zlocha@dfnsp.sk
Insights
Genetic testing for the HFE C282Y mutation is crucial for diagnosing hereditary hemochromatosis. Early detection through DNA analysis and iron overload testing allows for curable treatment, preventing severe complications like cirrhosis.
Area of Science:
- Medical Genetics
- Hepatology
- Internal Medicine
Background:
- Hereditary hemochromatosis is a common genetic disorder in Caucasians.
- The HFE gene mutation C282Y is responsible for most type 1 hereditary hemochromatosis cases.
- Genetic testing confirms the diagnosis and aids in developing diagnostic algorithms.
Purpose of the Study:
- To confirm the diagnostic importance of HFE mutation genetic testing.
- To establish a diagnostic algorithm for hereditary hemochromatosis.
- To evaluate the role of C282Y mutation testing in suspected cases.
Main Methods:
- Analyzed C282Y mutation in 500 subjects.
- Indications for DNA analysis included unexplained hepatopathy, cirrhosis, diabetes, and signs of iron overload.
- Genotype-phenotype correlation was assessed.
Main Results:
- Identified 29 homozygotes, 75 heterozygotes, and 10 compound heterozygotes for C282Y/H63D mutations.
- Homozygotes frequently presented with liver disease, type 2 diabetes, arthritis, and cardiovascular issues.
- Significantly higher transferrin saturation and ferritin levels were observed in C282Y homozygotes compared to other genotypes.
Conclusions:
- DNA analysis significantly aids in diagnosing hereditary hemochromatosis.
- Early detection and treatment (phlebotomy) can prevent cirrhosis and normalize life expectancy.
- Recommended DNA analysis for transferrin saturation ≥45% and targeted screening of high-risk groups.
Background:
Hereditary hemochromatosis is considered one of the most common hereditary diseases in population of Caucasian origin. In recent years, a candidate gene for HLA-linked hemochromatosis, HFE, has been cloned, and a single G-to-A mutation resulting in a cysteine-to-tyrosine substitution (C282Y) has been identified in up to 80% of study patients with type 1 hereditary hemochromatosis. The purpose of the paper was to confirm the importance of genetic testing for HFE mutations in making the diagnosis of hemochromatosis and find out a suitable diagnostic algorithm for the indication of this form of diagnostics in patients suspected of hereditary hemochromatosis.
Patients And Methods:
The examination of C282Y mutation was conducted in 500 subjects. The most frequent indications for DNA analysis were hepatopathy of unknown ethiology, liver cirrhosis, diabetes mellitus, bronze skin pigmentation in connection with high serum iron concentration, elevated transferrin saturation and elevated serum ferritin levels.
Results:
In our group of patients, 29 homozygotes and 75 heterozygotes for C282Y mutation were identified, 10 patients carried both C282Y and H63D mutations of HFE gene (compound heterozygotes), whereas in 386 subjects the mutation was not found. The genotype-phenotype correlation showed that 22 homozygotes had liver affection proved by imaging and/or histologic methods. Except the liver disorders, the most common symptoms of these patients were type 2 diabetes mellitus or glucose tolerance disorder (10 patients), arthritis or joint pain (9 patients) and cardiovascular disorders, such as cardiomyopathy (2 patients). Bronze skin pigmentation was present in 9 homozygotes. Transferin saturation values were significantly higher in homozygotes for C282Y mutation as compared to C282Y heterozygotes (p < 0.001), C282Y/H63D compound heterozygotes (p < 0.05) or wild type subjects (p < 0.001) respectively. Also serum ferritin levels were significantly higher in homozygotes for C282Y mutation as compared to C282Y heterozygotes (p < 0.001), C282Y/H63D compound heterozygotes (p < 0.001) and wild type subjects (p < 0.001) respectively.
Conclusions:
Our observations confirm that DNA analysis significantly contributes to differential diagnostics of this severe, but in early recognition curable disease. Early detection and phlebotomy treatment prior to the onset of cirrhosis can reduce morbidity and normalize life expectancy. It is readily identified through biochemical testing for iron overload using serum transferrin saturation and genetic testing for C282Y homozygosity. DNA analysis is recommended in patients whose transferrin saturation is 45% or more on a repeated test. General population screening has been waived in preference to targeting high-risk groups such as first-degree relatives of affected individuals and those with secondary iron overload, especially patients with chronic liver disorders and chronic anemia. This screening strategy is likely to continue until uncertainties regarding the natural history of the disease, age-related penetrance, and management of asymptomatic individuals are clarified.
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