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Partial characterization of genes encoding the ATP-binding cassette proteins of Cryptosporidium parvum
1Department of Parasitology, Faculty of Medicine, University of Malaya, 50603 Kuala Lumpur, Malaysia.
Abstract:
The present study aims to explore the possible mechanisms underlying the multidrug resistance characteristic of Cryptosporidium parvum by detecting the presence of ATP-binding cassette (ABC) protein encoding genes, especially one that shows high similarity to members belonging to the multidrug resistance protein (MDR) and multidrug resistance associated protein (MRP) subfamilies. PCR using ABC-specific degenerate primers successfully amplified two unique fragments, designated Cpnbd1 and Cpnbd2, from C. parvum genomic DNA. Cpnbd1 exhibited high degree of homology (99-100%) with the nucleotide- binding domains (NBDs) at the NH2 -terminal halves of two previously reported ABC proteins (CpABC and CpABC1) of human and bovine origin C. parvum isolates. It is likely that CpABC, CpABC1 and Cpnbd1 were encoded by homologous genes of a type of ABC transporter protein found in different C. parvum isolates. However, Cpnbd2 showed moderate levels of similarities (28-49%) to the NBDs of four ABC proteins characterised in C. parvum to date. Therefore, Cpnbd2 could be a novel member of an ABC superfamily of proteins in C. parvum. Phylogenetic analyses on a list of ABC transporters known to associate with MDR phenotype has significantly linked Cpnbd1 and Cpnbd2 to these transporters, thus suggesting that Cpnbd1 and Cpnbd2 proteins may contribute to the intrinsic multidrug resistance phenotype of C. parvum.
Insights
This study identifies two ATP-binding cassette (ABC) genes, Cpnbd1 and Cpnbd2, in Cryptosporidium parvum. These genes likely contribute to the parasite's multidrug resistance, offering potential targets for new treatments.
Area of Science:
- Molecular Parasitology
- Drug Resistance Mechanisms
- Genomics
Background:
- Cryptosporidium parvum exhibits intrinsic multidrug resistance, complicating treatment.
- ATP-binding cassette (ABC) transporters are frequently implicated in multidrug resistance across various organisms.
Purpose of the Study:
- To investigate the genetic basis of multidrug resistance in C. parvum.
- To identify and characterize ABC transporter genes potentially involved in this resistance.
Main Methods:
- Polymerase Chain Reaction (PCR) using degenerate primers specific for ABC proteins.
- DNA sequencing and homology analysis of amplified fragments.
- Phylogenetic analysis of identified ABC transporter genes.
Main Results:
- Two unique ABC gene fragments, Cpnbd1 and Cpnbd2, were successfully amplified from C. parvum.
- Cpnbd1 showed high homology to known ABC transporter nucleotide-binding domains.
- Cpnbd2 displayed moderate similarity to known ABC proteins, suggesting it may be a novel member.
Conclusions:
- Cpnbd1 and Cpnbd2 are identified as potential contributors to C. parvum's multidrug resistance.
- Phylogenetic analyses link these genes to known multidrug resistance-associated transporters.
- Further research into these ABC proteins could reveal new therapeutic targets.
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