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Updated: Aug 6, 2026

Phosphopeptide Enrichment Coupled with Label-free Quantitative Mass Spectrometry to Investigate the Phosphoproteome in Prostate Cancer
Published on: August 2, 2018
Emerging applications for phospho-proteomics in cancer molecular therapeutics
Michael F Moran1, Jiefei Tong, Paul Taylor
1Cancer Program, Hospital For Sick Children, and McLaughlin Centre for Molecular Medicine, and Banting and Best Department of Medical Research, University of Toronto, Ontario, Canada. m.moran@utoronto.ca
Abstract:
Protein phosphorylation is a key mechanism of cell regulation in normal and cancer cells. Various new cancer drugs and drug candidates are aimed at protein kinase targets. However, selecting patients likely to respond to these treatments, even among individuals with tumors expressing validated kinase targets remains a major challenge. There exists a need for biomarkers to facilitate the monitoring of modulation of drug-targeted kinase pathways. Phospho-proteomics involves the enrichment of phosphorylated proteins from tissue, and the application of technologies such as mass spectrometry (MS) for the identification and quantification of protein phosphorylation sites. It has potential to provide pharmacodynamic readouts of disease states and cellular drug responses in tumor samples, but technical hurdles and bioinformatics challenges will need to be addressed.
Insights
Identifying patients for targeted cancer therapies is challenging. Phospho-proteomics offers potential biomarkers to monitor drug effects on kinase pathways, but requires overcoming technical and bioinformatics hurdles.
Area of Science:
- Cellular biology
- Biochemistry
- Oncology
Background:
- Protein phosphorylation regulates normal and cancer cell functions.
- Targeted cancer therapies focus on protein kinase pathways.
- Patient selection for kinase-targeted drugs remains a significant challenge.
Purpose of the Study:
- To explore the potential of phospho-proteomics as a biomarker for monitoring drug-targeted kinase pathways.
- To address the need for biomarkers in personalized cancer therapy.
Main Methods:
- Phospho-proteomics involves enriching phosphorylated proteins from tissues.
- Mass spectrometry (MS) is used for identifying and quantifying phosphorylation sites.
- This approach aims to provide pharmacodynamic readouts of drug responses.
Main Results:
- Phospho-proteomics has the potential to offer pharmacodynamic readouts.
- It can provide insights into disease states and cellular drug responses in tumors.
Conclusions:
- Phospho-proteomics shows promise for monitoring targeted cancer therapy effectiveness.
- Technical and bioinformatics challenges must be overcome for clinical application.
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