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Peptide-based Identification of Functional Motifs and their Binding Partners
Published on: June 30, 2013
Lack of correlation between SIV-Nef evolution and rapid disease progression in morphine-dependent nonhuman primate
Richard J Noel1, Alia Toro-Bahamonde, Ziomara Marrero-Otero
1Department of Biochemistry, Ponce School of Medicine, Ponce, PR 00716. rnoel@psm.edu
Abstract:
Six morphine-dependent and two control macaques were infected in an SIV/SHIV nonhuman primate model of AIDS. Three animals in the morphine group rapidly developed clinical disease and died within the timeframe of this study. The sequence evolution of nef in plasma virus was assessed at 4, 12, and 20 weeks postinfection. Cloned sequences were compared phylogenetically against each other as well as against the inoculum virus clones to determine the effect of morphine and rate of disease progression on diversity and divergence, respectively. Unlike our earlier studies of tat and env, nef evolution was not affected by morphine abuse or by rapid disease progression. The results suggest that although the evolution of other loci is inversely correlated to the onset and rate of clinical disease, differential evolution of nef is related neither to drug abuse nor to rapid progression within the first 20 weeks of infection.
Insights
Morphine abuse and rapid disease progression did not impact the evolution of the nef gene in SIV/SHIV-infected macaques. This suggests differential evolution of nef is unrelated to drug abuse or disease speed within 20 weeks.
Area of Science:
- Virology and Immunology
- Neuroscience and Drug Abuse Research
- Nonhuman Primate Models
Background:
- Acquired Immunodeficiency Syndrome (AIDS) pathogenesis is complex, influenced by viral factors and host conditions.
- Morphine abuse is known to affect immune function and disease progression in viral infections.
- Understanding viral gene evolution, such as the nef gene, is crucial for comprehending disease dynamics.
Purpose of the Study:
- To investigate the effect of morphine dependence on the evolutionary dynamics of the nef gene in Simian Immunodeficiency Virus (SIV)/Simian-Human Immunodeficiency Virus (SHIV) infection.
- To determine if rapid disease progression influences nef sequence evolution in this nonhuman primate model.
- To compare nef evolution with previous findings on tat and env gene evolution under similar conditions.
Main Methods:
- Six morphine-dependent and two control macaques were infected with SIV/SHIV.
- Plasma virus was collected at 4, 12, and 20 weeks post-infection.
- Phylogenetic analysis of cloned nef sequences was performed to assess diversity and divergence relative to inoculum.
Main Results:
- Three morphine-dependent macaques exhibited rapid disease progression and mortality within the study period.
- Evolutionary analysis of the nef gene sequences revealed no significant effect of morphine abuse on diversity.
- Rapid disease progression did not correlate with altered nef sequence divergence, unlike tat and env genes.
Conclusions:
- The evolution of the nef gene in SIV/SHIV infection is independent of morphine abuse.
- Rapid disease progression in the early stages (20 weeks) does not influence nef gene evolution.
- Differential evolutionary patterns exist among viral genes (nef vs. tat/env) in response to host factors and disease severity.
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