Heterogeneity of vat(E)-carrying plasmids in Enterococcus faecium recovered from human and animal sources

Shabbir Simjee1, Yifan Zhang, Patrick F McDermott

  • 1Division of Animal and Food Microbiology, Office of Research, Center for Veterinary Medicine, U.S. Food and Drug Administration, Laurel, MD, USA.

Insights

Quinupristin/dalfopristin resistance in Enterococcus faecium is linked to the vat(E) gene. This resistance gene was found on various plasmids in both farm and human isolates, suggesting potential transmission.

Area of Science:

  • Microbiology
  • Antimicrobial Resistance
  • Molecular Biology

Background:

  • Enterococcus faecium is a significant opportunistic pathogen.
  • Quinupristin/dalfopristin (Q/D) resistance is an emerging concern in E. faecium.
  • The vat(E) gene is implicated in Q/D resistance.

Purpose of the Study:

  • To investigate the genetic basis of Q/D resistance in E. faecium isolates from poultry farms and a human source.
  • To characterize the genetic relatedness and plasmid carriage of the vat(E) gene in these isolates.

Main Methods:

  • Polymerase chain reaction (PCR) for vat(E) detection.
  • Pulsed-field gel electrophoresis (PFGE) for strain typing.
  • Southern hybridization for plasmid analysis.

Main Results:

  • All analyzed E. faecium isolates (33 farm, 1 human) harbored the vat(E) gene.
  • PFGE revealed 14 distinct patterns, distinguishing the human isolate from farm isolates.
  • The vat(E) gene was located on an 11 kb plasmid, with five distinct plasmid hybridization types identified.
  • The human isolate's vat(E)-carrying plasmid showed high similarity to a farm isolate's plasmid.

Conclusions:

  • The vat(E) gene, conferring Q/D resistance, is carried on diverse plasmids within a heterogeneous E. faecium population.
  • Genetic similarities between plasmids from farm and human isolates suggest potential for transmission and acquisition by human-pathogenic E. faecium.

Related Concept Videos

Conjugation01:19

Conjugation

Conjugation is a form of horizontal gene transfer that primarily occurs in bacteria and some archaea, promoting genetic diversity and adaptation. Bacteria can acquire resistance genes through conjugative plasmids, allowing them to survive antibiotic treatments that would otherwise be lethal. This process involves direct contact between cells through specialized structures such as the sex pilus and is mediated by conjugative plasmids, including the F (fertility) factor.Conjugation requires...
Bacterial Gastroenteritis01:18

Bacterial Gastroenteritis

Bacterial gastroenteritis, characterized by diarrhea, abdominal cramps, and vomiting, is often caused by ingestion of contaminated food or water and is frequently associated with pathogenic Escherichia coli strains. These microbes exploit two principal mechanisms to inflict disease.Shiga toxin–producing E. coli, also referred to as STEC—notably O157:H7—release Shiga toxins that target ribosomes, blocking protein synthesis. The B subunit of the toxin binds the host glycolipid receptor...
Plasmids01:28

Plasmids

Plasmids are extrachromosomal DNA molecules found in bacteria, archaea, and some eukaryotic microbes like yeast. These small, circular DNA structures typically contain fewer than 30 genes, although some may exist linearly. Plasmids vary in their number within a cell, known as copy number. Single-copy plasmids are present in one copy per cell and multi-copy plasmids are present in multiple copies, reaching over 100 copies per cell.Plasmids usually replicate independently of the chromosomal DNA...
Bacteriophages of the Human Virome01:23

Bacteriophages of the Human Virome

Bacteriophages are found throughout the human body. They may even outnumber eukaryotic viruses, forming an important and dynamic component of the human virome. Indeed, phages represent the most abundant viral entities, with densities in the gut reaching up to 10⁹ particles per gram of fecal matter, and many belonging to orders such as Caudovirales and Microviridae, while a substantial proportion remains unclassified as viral “dark matter.”Lysogeny and Genetic ExchangeIn the gut, bacteriophages...