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Characterize Disease-related Mutants of RAF Family Kinases by Using a Set of Practical and Feasible Methods
Published on: July 17, 2019
Frequent alterations in the expression of serine/threonine kinases in human cancers
Maria Capra1, Paolo Giovanni Nuciforo, Stefano Confalonieri
1Istituto FIRC di Oncologia Molecolare, Milan, Italy.
Abstract:
Protein kinases constitute a large family of regulatory enzymes involved in the homeostasis of virtually every cellular process. Subversion of protein kinases has been frequently implicated in malignant transformation. Within the family, serine/threonine kinases (STK) have received comparatively lesser attention, vis-a-vis tyrosine kinases, in terms of their involvement in human cancers. Here, we report a large-scale screening of 125 STK, selected to represent all major subgroups within the subfamily, on nine different types of tumors ( approximately 200 patients), by using in situ hybridization on tissue microarrays. Twenty-one STK displayed altered levels of transcripts in tumors, frequently with a clear tumor type-specific dimension. We identified three patterns of alterations in tumors: (a) overexpression in the absence of expression in the normal tissues (10 kinases), (b) overexpression in the presence of expression by normal tissues (8 kinases), and (c) underexpression (3 kinases). Selected members of the three classes were subjected to in-depth analysis on larger case collections and showed significant correlations between their altered expression and biological and/or clinical variables. Our findings suggest that alteration in the expression of STK is a relatively frequent occurrence in human tumors. Among the overexpressed kinases, 10 were undetectable in normal controls and are therefore ideal candidates for further validation as potential targets of molecular cancer therapy.
Insights
Altered serine/threonine kinase (STK) expression is common in human cancers. Ten STKs overexpressed in tumors but absent in normal tissues are potential targets for cancer therapy.
Area of Science:
- Molecular Biology
- Oncology
- Biochemistry
Background:
- Protein kinases regulate cellular processes; their dysregulation is linked to cancer.
- Serine/threonine kinases (STK) are less studied in cancer compared to tyrosine kinases.
Purpose of the Study:
- To screen a large set of serine/threonine kinases (STK) for altered expression in various human tumors.
- To identify novel STKs as potential therapeutic targets in oncology.
Main Methods:
- In situ hybridization on tissue microarrays.
- Screening of 125 STKs across nine tumor types (approx. 200 patients).
- In-depth analysis of selected STKs on larger patient cohorts.
Main Results:
- Twenty-one STKs showed altered transcript levels in tumors, often specific to tumor type.
- Identified three alteration patterns: overexpression without normal tissue expression (10 STKs), overexpression with normal tissue expression (8 STKs), and underexpression (3 STKs).
- Correlations found between altered STK expression and clinical/biological variables.
Conclusions:
- Altered STK expression is frequent in human tumors.
- Ten STKs overexpressed in tumors and absent in normal tissues are promising candidates for molecular cancer therapy development.
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