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Updated: Jul 20, 2026

Testing the Role of Multicopy Plasmids in the Evolution of Antibiotic Resistance
Published on: May 2, 2018
The CTX-M beta-lactamase pandemic
Rafael Cantón1, Teresa M Coque
1Servicio de Microbiología, Hospital Ramón y Cajal, 28034-Madrid, Spain.
Abstract:
In the past decade CTX-M enzymes have become the most prevalent extended-spectrum beta-lactamases, both in nosocomial and in community settings. The insertion sequences (ISs) ISEcp1 and ISCR1 (formerly common region 1 [CR1] or orf513) appear to enable the mobilization of chromosomal beta-lactamase Kluyvera species genes, which display high homology with blaCTX-Ms. These ISs are preferentially linked to specific genes: ISEcp1 to most blaCTX-Ms, and ISCR1 to blaCTX-M-2 or blaCTX-M-9. The blaCTX-M genes embedded in class 1 integrons bearing ISCR1 are associated with different Tn402-derivatives, and often with mercury Tn21-like transposons. The blaCTX-M genes linked to ISEcp1 are often located in multidrug resistance regions containing different transposons and ISs. These structures have been located in narrow and broad host-range plasmids belonging to the same incompatibility groups as those of early antibiotic resistance plasmids. These plasmids frequently carry aminoglycoside, tetracycline, sulfonamide or fluoroquinolone resistance genes [qnr and/or aac(6')-Ib-cr], which would have facilitated the dissemination of blaCTX-M genes because of co-selection processes. In Escherichia coli, they are frequently carried in well-adapted phylogenetic groups with particular virulence-factor genotypes. Also, dissemination has been associated with different clones (CTX-M-9 or CTX-M-14 producers) or epidemic clones associated with specific enzymes such as CTX-M-15. All these events might have contributed to the current pandemic CTX-M beta-lactamase scenario.
Insights
Insertion sequences ISEcp1 and ISCR1 mobilize CTX-M beta-lactamase genes, driving their spread via plasmids. Co-selection with other resistance genes in Escherichia coli facilitates this global pandemic of extended-spectrum beta-lactamases.
Area of Science:
- Microbiology
- Genetics
- Molecular Biology
Background:
- CTX-M enzymes are the leading cause of extended-spectrum beta-lactamase resistance in healthcare and community settings.
- Insertion sequences (ISs) ISEcp1 and ISCR1 are implicated in the mobilization of beta-lactamase genes from Kluyvera species, showing high homology to blaCTX-Ms.
- These ISs exhibit specific gene associations: ISEcp1 with most blaCTX-Ms, and ISCR1 with blaCTX-M-2 or blaCTX-M-9.
Purpose of the Study:
- To investigate the mechanisms and genetic structures facilitating the widespread dissemination of CTX-M extended-spectrum beta-lactamases.
- To understand the role of insertion sequences and mobile genetic elements in the evolution and spread of CTX-M-producing bacteria.
Main Methods:
- Analysis of genetic structures, including insertion sequences (ISEcp1, ISCR1), integrons, and transposons, associated with blaCTX-M genes.
- Plasmid analysis to identify host-range, incompatibility groups, and co-resistance genes.
- Phylogenetic and genotypic analysis of Escherichia coli isolates carrying CTX-M genes.
Main Results:
- blaCTX-M genes linked to ISEcp1 are often found in multidrug resistance regions, while those linked to ISCR1 are embedded in class 1 integrons and associated with Tn21-like transposons.
- These genetic structures are located on plasmids that frequently co-harbor resistance genes for aminoglycosides, tetracyclines, sulfonamides, and fluoroquinolones (qnr, aac(6')-Ib-cr).
- Dissemination is further driven by specific clones and epidemic strains of Escherichia coli, such as CTX-M-15 producers.
Conclusions:
- The mobilization by ISEcp1 and ISCR1, coupled with co-selection on mobile genetic elements and plasmids, has significantly contributed to the current pandemic of CTX-M beta-lactamases.
- Understanding these genetic dissemination pathways is crucial for combating the spread of antibiotic resistance.
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