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Updated: Jul 20, 2026

Two- and Three-Dimensional Live Cell Imaging of DNA Damage Response Proteins
Published on: September 28, 2012
A family of diverse Cul4-Ddb1-interacting proteins includes Cdt2, which is required for S phase destruction of the
Jianping Jin1, Emily E Arias, Jing Chen
1Department of Pathology, Harvard Medical School, Boston, Massachusetts 02115, USA.
Abstract:
Cul4 E3 ubiquitin ligases contain the cullin 4 scaffold and the triple beta propeller Ddb1 adaptor protein, but few substrate receptors have been identified. Here, we identify 18 Ddb1- and Cul4-associated factors (DCAFs), including 14 containing WD40 repeats. DCAFs interact with multiple surfaces on Ddb1, and the interaction of WD40-containing DCAFs with Ddb1 requires a conserved "WDXR" motif. DCAF2/Cdt2, which is related to S. pombe Cdt2, functions in Xenopus egg extracts and human cells to destroy the replication licensing protein Cdt1 in S phase and after DNA damage. Depletion of human Cdt2 causes rereplication and checkpoint activation. In Xenopus, Cdt2 is recruited to replication forks via Cdt1 and PCNA, where Cdt1 ubiquitylation occurs. These studies uncover diverse substrate receptors for Cul4 and identify Cdt2 as a conserved component of the Cul4-Ddb1 E3 that is essential to destroy Cdt1 and ensure proper cell cycle regulation of DNA replication.
Insights
Researchers identified 18 Cul4-Ddb1-associated factors (DCAFs), including Cdt2. Cdt2 is crucial for degrading the Cdt1 protein, ensuring proper DNA replication and cell cycle regulation.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Cul4 E3 ubiquitin ligases are crucial for cellular processes but have few identified substrate receptors.
- Ddb1 adaptor protein is a key component of Cul4 E3 ligases.
Purpose of the Study:
- To identify novel substrate receptors for Cul4 E3 ubiquitin ligases.
- To elucidate the function of these receptors in cell cycle regulation and DNA replication.
Main Methods:
- Protein interaction studies to identify Ddb1- and Cul4-associated factors (DCAFs).
- Functional assays in Xenopus egg extracts and human cells to determine the role of identified DCAFs.
- Ubiquitylation assays to investigate substrate degradation pathways.
Main Results:
- Identified 18 DCAFs, 14 with WD40 repeats, interacting with Ddb1 via a conserved WDXR motif.
- DCAF2/Cdt2 targets the replication licensing protein Cdt1 for degradation in S phase and after DNA damage.
- Depletion of Cdt2 leads to DNA rereplication and checkpoint activation.
Conclusions:
- Cul4-Ddb1 E3 ligases possess diverse substrate receptors.
- Cdt2 is a conserved Cul4-Ddb1 E3 ligase component essential for Cdt1 degradation and cell cycle control of DNA replication.
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