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A Fluorescence-based Method to Study Bacterial Gene Regulation in Infected Tissues
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Sigma X induces competence gene expression in Streptococcus pyogenes.

Robyn L Woodbury1, Xin Wang, Charles P Moran

  • 1Department of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA 30322, USA.

Research in Microbiology
|September 12, 2006
PubMed
Summary

Streptococcus pyogenes possesses DNA uptake machinery. Sigma X (σX) factor activates competence genes, suggesting this pathogen may develop genetic transformation capabilities.

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Area of Science:

  • Microbiology
  • Molecular Biology
  • Genetics

Background:

  • Streptococcus pyogenes, a human pathogen, was not previously known to be competent for DNA uptake.
  • The bacterium harbors genes for DNA uptake and recombination, with promoters containing a conserved CIN-box sequence.
  • This CIN-box is recognized by the alternative RNA polymerase sigma factor X (σX).

Purpose of the Study:

  • To investigate the role of sigma X (σX) in regulating competence genes in Streptococcus pyogenes.
  • To determine if σX can induce the expression of DNA uptake and recombination machinery.
  • To explore the potential for genetic transformation in S. pyogenes.

Main Methods:

  • Microarray analysis to assess global gene expression changes induced by σX.
  • Real-time RT-PCR to quantify the induction levels of specific competence-related transcripts.
  • In vitro transcription assays using purified RNA polymerase containing σX.

Main Results:

  • Microarray data revealed that σX significantly induces the expression of competence genes in S. pyogenes.
  • Real-time RT-PCR confirmed 2-265-fold induction of these transcripts by σX.
  • The gene femB, an ortholog of a Staphylococcus aureus virulence factor, was directly transcribed in vitro by σX-containing RNA polymerase, confirming σX activation of a CIN-box gene.

Conclusions:

  • Sigma X (σX) directly activates the expression of competence genes in Streptococcus pyogenes.
  • The induction of competence machinery by σX suggests that S. pyogenes strains may be capable of natural genetic transformation.
  • This finding has implications for understanding the evolution and pathogenicity of this important human pathogen.