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Updated: Jul 20, 2026

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
[Pyruvate dehydrogenase deficit associated to the C515T mutation in exon 6 of the E1alpha gene]
O Blanco-Barca1, C Gomez-Lado, E Rodrigo-Saez
1Departamendo de Pediatría, Servicio de Neuropediatría, Hospital Clinico Universitario, Santiago de Compostela, 15706 Santiago de Compostela, Espana.
Insights
Pyruvate dehydrogenase deficiency in a female infant caused severe brain malformations. A novel C515T mutation in the PDHE1alpha gene was identified, even with normal enzyme activity in tissues.
Area of Science:
- Biochemistry
- Genetics
- Neurology
Background:
- Pyruvate dehydrogenase (PDH) deficiency is a primary cause of congenital lactic acidosis.
- A rare subtype affects females, presenting with dysmorphic syndrome and severe cerebral malformations, often linked to the PDHE1alpha gene.
Observation:
- An 8-month-old female infant exhibited microcephaly, dysmorphic features, hypotonia, and seizures.
- Brain MRI revealed significant atrophy, ventricular dilatation, and agenesis of the corpus callosum.
- Elevated lactic and pyruvic acid levels were noted in blood and CSF, alongside high CSF alanine.
Findings:
- Despite normal PDH complex and mitochondrial respiratory chain activity in fibroblasts and muscle, a novel C515T mutation in exon 6 of the PDHE1alpha gene was detected.
- This mutation resulted in a P172L amino acid change, confirmed not to be a common polymorphism.
Implications:
- This case highlights a novel mutation causing PDH deficiency with severe neurological consequences.
- Normal PDH enzyme activity in accessible tissues does not rule out the condition, emphasizing the importance of genetic testing.
Introduction:
Pyruvate dehydrogenase (PDH) deficiency constitutes the most frequent metabolic origin of congenital lactic acidosis and is also responsible for a less usual form, found exclusively in females, which leads to a dysmorphic syndrome accompanied by severe cerebral malformations. The most common defect affects fraction E1alpha (gene Xp22.1-22.2).
Aim:
To report the case of a young female with PDH deficiency, dysmorphic syndrome, cerebral deformations and an unidentified mutation in the corresponding gene.
Case Report:
An 8-month-old female with microcephaly, a narrow forehead, nasal hypoplasia, anteverted nostrils, thin lips, axial hypotonia, epileptic seizures and an umbilical hernia. Magnetic resonance imaging of the brain revealed intense supra- and infratentorial cortico-subcortical atrophy, ventricular dilatation and agenesis of the corpus callosum. Lactic and pyruvic acid concentrations were high both in blood and in cerebrospinal fluid (CSF), and the level of alanine was high in CSF. Muscular histology results were normal. PDH complex activity in fibroblasts and in muscle tissue, as well as that of the mitochondrial respiratory chain complexes in muscle homogenate, were found to be normal. A molecular genetic study of the gene for PDHE1alpha, both in formed elements in the blood and in fibroblasts, showed a C > T change in nucleotide 515 (C515T) of exon 6, which causes a P172L change in the protein. A study of 108 controls ruled out the possibility of a polymorphism. The parents did not have the mutation.
Conclusions:
The C515T mutation of exon 6 of the gene for PDH E1alpha is described. Normal activity of the PDH complex in fibroblasts and in muscle tissue does not exclude this condition.
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