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Microplitis demolitor bracovirus genome segments vary in abundance and are individually packaged in virions
Markus H Beck1, Ross B Inman, Michael R Strand
1Department of Entomology and Center for Tropical and Emerging Global Diseases, University of Georgia, Athens, GA 30602, USA.
Abstract:
Polydnaviruses (PDVs) are distinguished by their unique association with parasitoid wasps and their segmented, double-stranded (ds) DNA genomes that are non-equimolar in abundance. Relatively little is actually known, however, about genome packaging or segment abundance of these viruses. Here, we conducted electron microscopy (EM) and real-time polymerase chain reaction (PCR) studies to characterize packaging and segment abundance of Microplitis demolitor bracovirus (MdBV). Like other PDVs, MdBV replicates in the ovaries of females where virions accumulate to form a suspension called calyx fluid. Wasps then inject a quantity of calyx fluid when ovipositing into hosts. The MdBV genome consists of 15 segments that range from 3.6 (segment A) to 34.3 kb (segment O). EM analysis indicated that MdBV virions contain a single nucleocapsid that encapsidates one circular DNA of variable size. We developed a semi-quantitative real-time PCR assay using SYBR Green I. This assay indicated that five (J, O, H, N and B) segments of the MdBV genome accounted for more than 60% of the viral DNAs in calyx fluid. Estimates of relative segment abundance using our real-time PCR assay were also very similar to DNA size distributions determined from micrographs. Analysis of parasitized Pseudoplusia includens larvae indicated that copy number of MdBV segments C, B and J varied between hosts but their relative abundance within a host was virtually identical to their abundance in calyx fluid. Among-tissue assays indicated that each viral segment was most abundant in hemocytes and least abundant in salivary glands. However, the relative abundance of each segment to one another was similar in all tissues. We also found no clear relationship between MdBV segment and transcript abundance in hemocytes and fat body.
Insights
Polydnaviruses (PDVs) have segmented genomes with varying segment abundance. This study used electron microscopy and real-time PCR to analyze Microplitis demolitor bracovirus (MdBV) genome packaging and segment distribution in wasps and hosts.
Area of Science:
- Virology
- Insect Pathology
- Molecular Biology
Background:
- Polydnaviruses (PDVs) are unique viruses associated with parasitoid wasps.
- Their segmented double-stranded DNA genomes have non-equimolar segment abundance, with limited knowledge on genome packaging and segment distribution.
- Microplitis demolitor bracovirus (MdBV) replicates in female wasp ovaries, forming virions in calyx fluid.
Purpose of the Study:
- To characterize the genome packaging and segment abundance of Microplitis demolitor bracovirus (MdBV).
- To investigate the distribution and relative abundance of MdBV genome segments within the wasp and its host.
- To correlate viral segment abundance with transcript levels.
Main Methods:
- Electron microscopy (EM) was used to analyze virion structure and DNA packaging.
- A semi-quantitative real-time PCR assay with SYBR Green I was developed to quantify viral DNA segment abundance.
- MdBV segment abundance was analyzed in wasp calyx fluid, parasitized host larvae (Pseudoplusia includens), and different wasp tissues.
Main Results:
- EM revealed MdBV virions contain a single nucleocapsid encapsidating one circular DNA of variable size.
- Five MdBV segments (J, O, H, N, B) constituted over 60% of viral DNA in calyx fluid, correlating with DNA size distributions.
- Segment copy numbers varied between hosts, but relative abundance within a host mirrored calyx fluid; segments were most abundant in hemocytes and least in salivary glands, with similar relative abundance across tissues.
- No clear relationship was found between MdBV segment and transcript abundance in hemocytes and fat body.
Conclusions:
- MdBV genome packaging involves single nucleocapsids with variable DNA, and segment abundance is non-equimolar, with specific segments dominating.
- The relative abundance of MdBV segments is consistent within the wasp and its host, suggesting regulated packaging or replication.
- Tissue-specific distribution of viral segments occurs, but their relative proportions remain consistent, indicating tissue-specific regulation of segment expression or stability rather than packaging.
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