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Updated: Jul 19, 2026

Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations
Published on: December 7, 2021
Beyond strain typing and molecular epidemiology: integrated genetic epidemiology of infectious diseases
1Centre d'Etudes sur le Polymorphisme des Microorganismes (CEPM), UMR CNRS/ORSTOM 9926, ORSTOM, BP 5045, 34032 Montpellier Cedex 1, France.
Abstract:
In the past 20 years, genetic and molecular methods for characterizing pathogen strains have taken a major place in modern approaches to epidemiology of parasitic and other infectious diseases. Here, Michel Tibayrenc explains the main concepts used in this field of research, with special emphasis on the approaches developed in his team, and suggests future avenues to explore.
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