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DNA Microarrays02:34

DNA Microarrays

Microarrays are high-throughput and relatively inexpensive assays that can be automated to analyze large quantities of data at a time. They are used in genome-wide studies to compare gene or protein expression under two varied conditions, such as healthy and diseased states. Microarrays consist of glass or silica slides on which probe molecules are covalently attached through surface functionalization. Most commonly, the slides are prepared through the chemisorption of silanes to silica...
Karyotyping01:17

Karyotyping

Describing the number and physical features of chromosomes can reveal abnormalities that underlie genetic diseases. This description is facilitated by special staining techniques that produce a particular banding pattern on each chromosome. State-of-the-art techniques make this approach even more powerful, enabling the detection of individual genes that cause disease.A Simple Chromosome Staining Technique Provides Valuable Scientific InsightSome genetic diseases can be detected by looking at...
FISH - Fluorescent In-situ Hybridization02:07

FISH - Fluorescent In-situ Hybridization

Fluorescence in situ hybridization, or FISH, was developed in the early 1980s and has quickly become one of the most widely used techniques in cytogenetics. Labeled probes are used to bind complementary DNA or RNA sequences on a chromosome or in a region within a cell. Earlier, the probes could only be obtained by cloning or reverse transcription of a DNA template. Currently, the probe oligonucleotides can be synthesized synthetically. Additionally, with the advancement of optical techniques,...

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Related Experiment Video

Updated: Jul 19, 2026

Array Comparative Genomic Hybridization (Array CGH) for Detection of Genomic Copy Number Variants
09:16

Array Comparative Genomic Hybridization (Array CGH) for Detection of Genomic Copy Number Variants

Published on: February 21, 2015

Application of array-based comparative genomic hybridization to clinical diagnostics.

Bassem A Bejjani1, Lisa G Shaffer

  • 1Signature Genomic Laboratories, LLC, 44 W. 6th Ave., Suite 202, Spokane, WA 99204, USA. bejjani@signaturegenomics.com

The Journal of Molecular Diagnostics : JMD
|October 27, 2006
PubMed
Summary

Microarray-based comparative genomic hybridization (array CGH) offers high-resolution DNA copy number analysis, transforming from a research tool to a clinical diagnostic instrument for detecting chromosomal abnormalities.

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Related Experiment Videos

Last Updated: Jul 19, 2026

Array Comparative Genomic Hybridization (Array CGH) for Detection of Genomic Copy Number Variants
09:16

Array Comparative Genomic Hybridization (Array CGH) for Detection of Genomic Copy Number Variants

Published on: February 21, 2015

Technical Demonstration of Whole Genome Array Comparative Genomic Hybridization
16:37

Technical Demonstration of Whole Genome Array Comparative Genomic Hybridization

Published on: August 5, 2008

DNA Microarrays: Sample Quality Control, Array Hybridization and Scanning
09:27

DNA Microarrays: Sample Quality Control, Array Hybridization and Scanning

Published on: March 15, 2011

Area of Science:

  • Genomics
  • Molecular Biology
  • Clinical Diagnostics

Background:

  • Microarray-based comparative genomic hybridization (array CGH) originated as a research tool for cancer genomic alteration studies.
  • It enables high-resolution evaluation of DNA copy number alterations linked to chromosome abnormalities.

Purpose of the Study:

  • To review the evolution of array CGH from a research tool to a clinical diagnostic instrument.
  • To evaluate platforms and approaches for clinical array CGH applications.
  • To compare whole-genome and targeted arrays for diagnostic use.

Main Methods:

  • Differential labeling of test and reference genomic DNA samples.
  • Simultaneous hybridization to DNA targets on a solid platform (e.g., glass slide).
  • Review of existing array CGH technologies and clinical applications.

Main Results:

  • Array CGH provides distinct advantages over conventional cytogenetics.
  • It can detect most microscopic and submicroscopic chromosomal abnormalities.
  • The technology has matured into a reliable diagnostic instrument.

Conclusions:

  • Array CGH is revolutionizing cytogenetic diagnostics.
  • It offers clinicians a powerful tool for enhanced diagnostic capabilities.
  • The platform facilitates the detection of a wide range of genomic alterations.