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Updated: Jul 19, 2026

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Collection and Extraction of Occupational Air Samples for Analysis of Fungal DNA
Published on: May 2, 2018
A two-stage cyclone using microcentrifuge tubes for personal bioaerosol sampling
William G Lindsley1, Detlef Schmechel, Bean T Chen
1Health Effects Lab, National Institute for Occupational Safety and Health, Centers for Disease Control and Prevention, Morgantown, West Virginia, USA. wlindsley@cdc.gov
Journal of Environmental Monitoring : JEM
|November 1, 2006
Summary
This study introduces a novel personal bioaerosol sampler using a two-stage cyclone for collecting airborne biological particles into microcentrifuge tubes. The sampler efficiently captures fungal spores and is suitable for molecular analysis, advancing personal exposure monitoring.
Area of Science:
- Environmental Science
- Aerosol Science
- Biotechnology
Background:
- Personal aerosol samplers are crucial for monitoring human exposure to airborne contaminants.
- Growing interest in analyzing bioaerosols using molecular and immunological methods necessitates improved sampling techniques.
- Existing methods may not efficiently collect or preserve bioaerosols for downstream molecular analysis.
Purpose of the Study:
- To develop and evaluate a novel personal bioaerosol sampler.
- To enable direct molecular and immunological analysis of collected bioaerosols.
- To fractionate airborne particles by aerodynamic diameter during personal sampling.
Main Methods:
- A two-stage cyclone personal sampler was designed to collect bioaerosols into 1.5 ml microcentrifuge tubes.
- The sampler's performance was assessed using fluorescent microspheres and aerosolized fungal spores.
- Cut-off diameters, aspiration efficiency, and collection efficiency were determined at different flow rates (2 and 3.5 L min⁻¹).
Main Results:
- The sampler achieved first and second stage cut-off diameters of 2.6 µm and 1.6 µm at 2 L min⁻¹, and 1.8 µm and 1 µm at 3.5 L min⁻¹.
- Aspiration efficiency was ≥98% for particles ≤3.1 µm and high for larger particles (89-96% for 6.2 µm).
- Over 92% of aerosolized fungal spores were collected in the tubes, with minimal loss to the back-up filter.
Conclusions:
- The developed personal sampler effectively collects bioaerosols suitable for molecular analysis (e.g., polymerase chain reaction, immunoassays).
- The two-stage cyclone design allows for aerodynamic size fractionation.
- This sampler is a valuable tool for personal bioaerosol monitoring and can be adapted for larger-scale air quality studies.

