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Published on: May 2, 2018
Regulatory cross-talk in the double par locus of plasmid pB171
Simon Ringgaard1, Gitte Ebersbach, Jonas Borch
1Department of Biochemistry and Molecular Biology, Campusvej 55, University of Southern Denmark, DK-5230 Odense M, Denmark.
Abstract:
The double par locus of Escherichia coli virulence factor pB171 consists of two adjacent and oppositely oriented par loci of different types, called par1 and par2. par1 encodes an actin ATPase (ParM), and par2 encodes an oscillating, MinD-like ATPase (ParA). The par loci share a central cis-acting region of approximately 200 bp, called parC1, located between the two par loci. An additional cis-acting region, parC2, is located downstream of the parAB operon of par2. Here we show that ParR of par1 and ParB of par2 bind cooperatively to unrelated sets of direct repeats in parC1 to form the cognate partition and promoter repression complexes. Surprisingly, ParB repressed transcription of the noncognate par operon, indicating cross-talk and possibly epistasis between the two systems. The par promoters, P1 and P2, affected each other negatively. The DNA binding activities of ParR and ParB correlated well with the observed transcriptional regulation of the par operons in vivo and in vitro. Integration host factor (IHF) was identified as a novel factor involved in par2-mediated plasmid partitioning.
Insights
The Escherichia coli double par locus involves two systems, par1 and par2, that interact. ParB from par2 surprisingly represses the par1 operon, revealing cross-talk in plasmid partitioning.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- The pB171 plasmid in Escherichia coli harbors a unique double par locus, comprising par1 and par2.
- par1 encodes ParM (actin ATPase), and par2 encodes ParA (MinD-like ATPase).
- These loci share cis-acting regions, parC1 and parC2, crucial for their function.
Purpose of the Study:
- To investigate the interaction and regulatory mechanisms between the par1 and par2 systems.
- To elucidate the roles of ParR and ParB proteins in DNA binding and transcriptional regulation.
- To identify novel factors involved in par2-mediated plasmid partitioning.
Main Methods:
- Electrophoretic mobility shift assays (EMSAs) to study protein-DNA interactions.
- In vitro and in vivo transcriptional assays to assess promoter activity.
- Genetic analysis to identify interacting factors.
Main Results:
- ParR (par1) and ParB (par2) bind cooperatively to distinct DNA repeats within parC1.
- ParB represses transcription of the noncognate par1 operon, demonstrating cross-talk.
- The par promoters (P1 and P2) exhibit negative cross-regulation.
- Integration host factor (IHF) is identified as a novel factor in par2-mediated partitioning.
Conclusions:
- The double par locus exhibits complex regulatory interactions and cross-talk between par1 and par2 systems.
- Cooperative DNA binding by ParR and ParB is essential for partitioning and transcriptional control.
- IHF plays a significant role in par2-mediated plasmid partitioning, highlighting a novel regulatory element.
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