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Updated: Jul 18, 2026

Analysis of LINE-1 Retrotransposition at the Single Nucleus Level
Published on: April 23, 2016
Active retrotransposition by a synthetic L1 element in mice
Wenfeng An1, Jeffrey S Han, Sarah J Wheelan
1High Throughput Biology Center and Department of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, 733 North Broadway, Baltimore, MD 21205, USA.
A synthetic Long interspersed element type 1 (L1) retrotransposon, ORFeus, shows high retrotransposition activity in mice. This engineered element demonstrates significant germ line and somatic insertion activity, suggesting its potential for in vivo mutagenesis applications.
Area of Science:
- Genetics
- Molecular Biology
- Genomics
Background:
- Long interspersed element type 1 (L1) retrotransposons are mobile genetic elements found in mammals.
- Native L1 elements exhibit limited activity in mice when used as transgenes.
- A synthetic L1 element, ORFeus, was previously developed with enhanced activity in cell culture.
Purpose of the Study:
- To investigate the in vivo retrotransposition activity of the synthetic L1 element, ORFeus, in a transgenic mouse model.
- To assess the potential of ORFeus as a tool for in vivo mutagenesis.
Main Methods:
- Development of a transgenic mouse model expressing ORFeus under a constitutive heterologous promoter.
- Analysis of germ line and somatic retrotransposition events in ORFeus-expressing mice.
- Precise mapping of insertion sites in the mouse genome.
Main Results:
- ORFeus demonstrated significant germ line retrotransposition, with frequencies over 20-fold higher than native L1 elements.
- Somatic transposition events were observed in 100% of analyzed animals, with an average of 17 easily recoverable insertions per animal.
- Nearly 200 insertions were mapped, showing a random distribution relative to genomic features like transcription units and GC content.
Conclusions:
- The synthetic L1 element ORFeus exhibits robust in vivo retrotransposition activity in both germ line and somatic tissues.
- ORFeus shows promise as an effective tool for in vivo mutagenesis in mice.
- The random distribution of insertions supports its utility for genome-wide mutagenesis screens.
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