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Peptide Scanning-assisted Identification of a Monoclonal Antibody-recognized Linear B-cell Epitope
Published on: March 24, 2017
Is the anti-sarcoma and anti-viral cytokine "plasma factor" a novel chicken Y-box protein?
Manohar V N Shirodkar1, Pravin B Sehgal
1Shirodkar Memorial Research Foundation, Mumbai, Pune, India.
Abstract:
A line of research beginning in the early 1960s with the observation that West Nile virus and, later, several strains of rabies virus could inhibit the development of the Rous sarcoma virus-induced tumor in the wing-web of chicken (a "sarcoma-blockade") eventually culminated in the characterization of a 14-kDa circulating anti-sarcoma and anti-viral activity christened "plasma factor" (PF) which, unlike the interferons, inhibited the replication of diverse RNA-containing viruses, but not of any DNA-containing viruses. The possibility that this 14 kDa protein represented a novel antiviral cytokine has been strengthened by analysis of partial amino acid sequencing data which suggest that this 14-kDa cytokine may correspond to the 127-amino acid-long chicken YB2-like protein (Locus: XP_423576) deduced very recently from the genomic sequencing of chicken. Biologically, proteins of the Y-box family (such as chicken YB1 and YB2) not only bind DNA and thus regulate transcription but also bind single-stranded RNA in a sequence-specific and reversible manner, repress viral RNA translation, inhibit retroviral transformation of chicken fibroblasts, and are known to regulate transcription of human immunodeficiency virus and hepatitis B virus. Taken together, the available data point to a novel anti-viral cytokine with a novel mechanism of action.
Insights
Researchers discovered a novel 14-kDa plasma factor (PF) that blocks sarcoma growth and inhibits RNA virus replication, potentially representing a new antiviral cytokine with a unique mechanism. This finding offers new avenues for antiviral therapies.
Area of Science:
- Virology
- Molecular Biology
- Immunology
Background:
- Early research in the 1960s observed that certain viruses could inhibit tumor development in chickens.
- This led to the identification of a "sarcoma-blockade" phenomenon.
- Further investigation focused on characterizing the underlying mechanism and factors involved.
Purpose of the Study:
- To characterize a circulating factor responsible for anti-sarcoma and anti-viral activity.
- To determine the nature and potential function of this factor.
- To explore its relationship with known antiviral mechanisms and cellular proteins.
Main Methods:
- Observation of viral inhibition of tumor development.
- Biochemical characterization of the active "plasma factor" (PF).
- Partial amino acid sequencing and comparison with known protein databases.
- Analysis of the biological functions of related Y-box family proteins.
Main Results:
- A 14-kDa circulating factor, termed "plasma factor" (PF), was identified.
- PF inhibits RNA virus replication but not DNA virus replication, distinguishing it from interferons.
- Amino acid sequencing suggests PF may be a chicken YB2-like protein.
- Y-box proteins are known to bind DNA and RNA, regulate transcription, and inhibit viral transformation.
Conclusions:
- The 14-kDa plasma factor (PF) represents a novel antiviral cytokine.
- PF likely possesses a unique mechanism of action, distinct from interferons.
- Its potential role in regulating viral replication and cellular processes warrants further investigation.
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