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Updated: Jul 18, 2026
09:37
An Integrated Approach for Microprotein Identification and Sequence Analysis
Published on: July 12, 2022
The UCSC genome browser database: update 2007
R M Kuhn1, D Karolchik, A S Zweig
1Center for Biomolecular Science and Engineering, University of California Santa Cruz (UCSC), Santa Cruz, CA 95064, USA. kuhn@soe.ucsc.edu
Nucleic Acids Research
|December 5, 2006
Summary
The UCSC Genome Browser Database offers comprehensive genomic data for vertebrates and invertebrates, featuring advanced visualization and querying tools for biological research.
Area of Science:
- Genomics
- Bioinformatics
- Comparative Genomics
Background:
- The University of California, Santa Cruz (UCSC) Genome Browser Database houses sequence and annotation data for numerous species.
- It provides a comprehensive resource for exploring genomic information at various scales.
Purpose of the Study:
- To present the capabilities and recent updates of the UCSC Genome Browser Database.
- To highlight its utility for researchers in genomics and related fields.
Main Methods:
- The database integrates assembly data, gene predictions, mRNA and EST alignments, and comparative genomics data.
- Web tools offer powerful visualization and querying for interactive data mining.
Main Results:
- As of September 2006, data for 13 vertebrate and 19 invertebrate species were available.
- Recent updates include 22 new assemblies, enhanced human variation annotation, VisiGene, phyloGif, and a redesigned Custom Track feature.
Conclusions:
- The UCSC Genome Browser provides a robust platform for accessing and analyzing diverse genomic datasets.
- Its continuous development with new features enhances its value for biological research and discovery.
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