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Published on: July 30, 2014
Concerning the dynamic instability of actin homolog ParM
David Popp1, Akihiro Yamamoto, Mitsusada Iwasa
1ERATO Actin Filament Dynamics Project, Japan Science and Technology Corporation, c/o RIKEN Harima Institute at Spring 8, Kouto, Sayo, Hyogo 679-5148, Japan. dpopp@spring8.or.jp
Abstract:
Using in vitro TIRF- and electron-microscopy, we reinvestigated the dynamics of native ParM, a prokaryotic DNA segregation protein and actin homolog. In contrast to a previous study, which used a cysteine ParM mutant, we find that the polymerization process of wild type ATP-ParM filaments consists of a polymerization phase and a subsequent steady state phase, which is dynamically unstable, like that of microtubules. We find that the apparent bidirectional polymerization of ParM, is not due to the intrinsic nature of this filament, but results from ParM forming randomly oriented bundles in the presence of crowding agents. Our results imply, that in the bacterium, ParM filaments spontaneously form bipolar bundles. Due to their intrinsic dynamic instability, ParM bundles can efficiently "search" the cytoplasmic lumen for DNA, bind it equally well at the bipolar ends and segregate it approximately symmetrically, by the insertion of ParM subunits at either end.
Insights
Wild type ParM protein filaments exhibit dynamic instability, similar to microtubules. This instability allows ParM bundles to efficiently search for and segregate DNA within bacterial cells.
Area of Science:
- Microbiology
- Molecular Biology
- Biophysics
Background:
- ParM is a prokaryotic DNA segregation protein and an actin homolog.
- Previous studies on ParM dynamics used cysteine mutants, potentially affecting results.
Purpose of the Study:
- To reinvestigate the dynamics of native ParM using wild type protein.
- To clarify the polymerization mechanism and behavior of ParM filaments.
Main Methods:
- In vitro Total Internal Reflection Fluorescence (TIRF) microscopy.
- In vitro Electron microscopy.
- Analysis of wild type ATP-ParM filament polymerization and bundling.
Main Results:
- Wild type ATP-ParM filaments exhibit a polymerization phase followed by a dynamically unstable steady state, akin to microtubules.
- Apparent bidirectional polymerization is an artifact of bundling caused by crowding agents, not an intrinsic filament property.
- ParM filaments spontaneously form bipolar bundles in vivo.
Conclusions:
- ParM's dynamic instability is crucial for its function in DNA segregation.
- Bipolar ParM bundles efficiently search the cytoplasm for DNA and facilitate symmetric segregation.
- Understanding ParM dynamics provides insights into bacterial chromosome organization and segregation mechanisms.
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