Carboxylmethylation affects the proteolysis of myelin basic protein by Staphylococcus aureus V8 proteinase
1Laboratory of Neurochemistry, University of Michigan Medical Center, Ann Arbor 48109-0720.
Abstract:
Bovine myelin basic protein (MBP), charge isoform 1 (C1) was carboxylmethylated by the enzyme D-aspartyl/L-isoaspartyl protein methyltransferase (EC. 2.1.1.77) and the carboxylmethylated protein was subjected to proteolysis by sequencing grade staphylococcal V8 proteinase at pH 4.0 to identify its carboxylmethylated modified aspartate and/or asparagine residues which are recognized by this methyltransferase. Native MBP, C1 was treated similarly and the proteolysis products were compared, using electrophoretic, chromatographic and amino acid sequencing techniques. Sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) revealed differences in the kinetics of proteolysis between the native and the carboxylmethylated MBP, C1 which were confirmed using HPLC. Partial sequencing of the native and carboxylmethylated fragments eluting at about 29 min (P29) revealed cleavage of native MBP, C1 at Gly-127-Gly-128 and of the carboxylmethylated MBP, C1 at Phe-124-Gly-125. Additional evidence including tryptic subdigestion of carboxylmethylated P29 disclosed the following partial sequence for this peptide: Gly-Tyr-Gly-Gly-Arg-Ala-Ser-Asp-Tyr-Lys-Ser-Ala-His-Lys-Gly-Leu-Lys- Gly-His-Asp-Ala-Gln-Gly-Thr-Leu-Ser-Lys-Ileu-Phe-Lys-. This sequence matches MBP residues 125-154. As a result of these findings, Asp-132 and Asp-144 were identified as two of the modified (isomerized or racemized) methyl-accepting L-aspartates in MBP. The results of the proteolysis experiments wherein the sequencing grade staphylococcal V8 proteinase was used at the rarely tested pH of 4.0, rather than at its commonly tested pH of 7.8, also disclose that the proteinase totally failed to recognize and hence cleave the two Glu-X bonds (Glu-82-Asn-83 and Glu-118-Gly-119) of MBP, preferring to cleave the protein at a number of hitherto unreported sites.
Insights
This study identifies specific aspartate residues in bovine myelin basic protein (MBP) that are modified by D-aspartyl/L-isoaspartyl protein methyltransferase. These findings reveal novel cleavage sites for staphylococcal V8 proteinase at pH 4.0.
Area of Science:
- Biochemistry
- Proteomics
- Enzymology
Background:
- Myelin basic protein (MBP) is crucial for myelin sheath integrity.
- Protein methylation, particularly at aspartate residues, plays a role in protein function and aging.
- D-aspartyl/L-isoaspartyl protein methyltransferase (EC. 2.1.1.77) catalyzes the repair of isomerized aspartate residues.
Purpose of the Study:
- To identify the specific aspartate and/or asparagine residues in bovine MBP (charge isoform 1, C1) that are recognized and carboxylmethylated by D-aspartyl/L-isoaspartyl protein methyltransferase.
- To investigate the effect of this methylation on the proteolysis of MBP by staphylococcal V8 proteinase.
- To characterize novel cleavage sites of staphylococcal V8 proteinase at pH 4.0.
Main Methods:
- Carboxymethylation of native bovine MBP, C1 using D-aspartyl/L-isoaspartyl protein methyltransferase.
- Proteolysis of native and carboxylmethylated MBP, C1 using sequencing grade staphylococcal V8 proteinase at pH 4.0.
- Analysis of proteolysis products using SDS-PAGE, HPLC, and amino acid sequencing.
Main Results:
- Carboxymethylation altered the proteolysis kinetics of MBP, C1, confirmed by SDS-PAGE and HPLC.
- Partial sequencing identified cleavage of native MBP, C1 at Gly-127-Gly-128 and carboxylmethylated MBP, C1 at Phe-124-Gly-125.
- Asp-132 and Asp-144 were identified as methyl-accepting L-aspartate residues in MBP.
- Staphylococcal V8 proteinase at pH 4.0 failed to cleave Glu-X bonds (Glu-82-Asn-83 and Glu-118-Gly-119) but cleaved at new sites.
Conclusions:
- Asp-132 and Asp-144 are key methyl-accepting sites for D-aspartyl/L-isoaspartyl protein methyltransferase in bovine MBP.
- Carboxymethylation of MBP influences its susceptibility to V8 proteinase digestion.
- The study reveals previously unreported cleavage specificities of staphylococcal V8 proteinase at pH 4.0.
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